LOCUS AEE74896.1 1003 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pumilio 4 protein.
ACCESSION CP002686-1812
PROTEIN_ID AEE74896.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PUM4"
/locus_tag="AT3G10360"
/gene_synonym="APUM4"
/gene_synonym="pumilio 4"
/inference="Similar to RNA sequence,
EST:INSD:BP816603.1,INSD:BX841201.1,INSD:EH856088.1,
INSD:BP790700.1,INSD:AU229984.1,INSD:AV782638.1,
INSD:ES060404.1,INSD:EL070828.1,INSD:EG467708.1,
INSD:BP630135.1,INSD:BP669722.1,INSD:AV522559.1,
INSD:AV541095.1,INSD:EL166815.1,INSD:EG467709.1,
INSD:BP794840.1,INSD:ES131536.1,INSD:BP785392.1,
INSD:AU238750.1,INSD:EL981801.1,INSD:BX839475.1,
INSD:BP590950.1,INSD:ES041165.1,INSD:ES018828.1,
INSD:BP826524.1,INSD:AV792231.1,INSD:BP820146.1,
INSD:BP630155.1,INSD:BP606224.1,INSD:EG455333.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT005311.1,INSD:AK117911.1"
/note="pumilio 4 (PUM4); FUNCTIONS IN: RNA binding,
binding; INVOLVED IN: biological_process unknown; LOCATED
IN: cellular_component unknown; EXPRESSED IN: male
gametophyte, cultured cell, pollen tube; EXPRESSED DURING:
L mature pollen stage, M germinated pollen stage; CONTAINS
InterPro DOMAIN/s: Pumilio RNA-binding repeat
(InterPro:IPR001313), Nucleic acid binding NABP
(InterPro:IPR012940), Armadillo-like helical
(InterPro:IPR011989), Armadillo-type fold
(InterPro:IPR016024); BEST Arabidopsis thaliana protein
match is: pumilio 1 (TAIR:AT2G29200.1); Has 3756 Blast
hits to 2007 proteins in 241 species: Archae - 0; Bacteria
- 4; Metazoa - 783; Fungi - 1274; Plants - 892; Viruses -
0; Other Eukaryotes - 803 (source: NCBI BLink)."
/db_xref="TAIR:AT3G10360"
/db_xref="Araport:AT3G10360"
intron_pos 232:0 (1/9)
intron_pos 498:1 (2/9)
intron_pos 673:2 (3/9)
intron_pos 721:0 (4/9)
intron_pos 757:0 (5/9)
intron_pos 828:0 (6/9)
intron_pos 865:0 (7/9)
intron_pos 930:0 (8/9)
intron_pos 988:1 (9/9)
BEGIN
1 MVTNSYMDTR SNLTSVNRGS NVDLEDRFQR ELESLLQQHR NQQSFGRERE RDIDVHRSGS
61 APPTVEGLLR AMDNQYLNNN NSDHRDVGNI SSITTSNGVE LLSDDELRWH PEYLSYYYSN
121 EHSNPRLPPP LLSREDWRVA QRFHNSESVF DPVGEWRKKT VEVDNSSSLF SVQPGVPVEQ
181 AENDLMELRN AVAQGRSQKV QRLDQGREDL IGLSGYSGLG PRRKSFADIL QEGLERDAAL
241 GSQLSRPASC NTFRDMKDAA VLSNFSAGGF DSPLAFHDSL HSTAKNSPNT MLGSTMSSPV
301 PRNRTPDSHL VGRSTASGLP PIGTRVGPVE KKNTFGTAIQ NCESYTAADV ADTLSRLNMS
361 EMSQVKENHM QSQLQVELEN QSDVMRYIPN GHKKALRQQN TAETKDHLFS ANYGGMSGYG
421 ASLGASTVGS HGQVNIPKRT SSSASLYSTS DHSRLGSVGL SDVNIRNGNI NGTDFSTAGG
481 YMAKNKLNSL AEHYSAEGSH LTGDGDRQSL NRLINQVASE LHSPVMDPHY SQYLHTASST
541 AAPIDHSLIR NNFGTSNGDT ANEYLAMLLA QNRQQLGNLN AANSRFFESP SYDLGNMYLG
601 NHLPSPSKNS RNFQNMRMSQ SASMMKVPFG GLQGSSHVDI GSTAEASLLE GFKNNKTRSL
661 ELSEIVGHVI EFSMDQYGSR FIQQKLETAT DEEKNAIFPE ILPYGRTLMT DVFGNYVIQK
721 FFEHGTTKQR KELAEQVTGH VLALSLQMYG CRVIQKALEV VELEQQARMV KELDGSVMKC
781 VHDQNGNHVI QKCIERLPQD WIQFIISSFY GKVLALSTHP YGCRVIQRVL EHIDDIETQR
841 IIMEEIMDSV CTLAQDQYGN YVIQHIIQHG KPHERSEIIN KLAGQIVKMS QQKFASNVVE
901 KCLTFGGPEE RQVLVNEMLG YTDENEPLQA MMKDPFGNYV VQKVLETCDD QSLALILSRI
961 KVHLNALKRY TYGKHIVARV EKLITTGERR IGLSSSLAAN TTP
//