LOCUS AEE74886.1 335 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Calcium-binding EF-hand family protein
protein.
ACCESSION CP002686-1801
PROTEIN_ID AEE74886.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G10300"
/inference="Similar to RNA sequence,
EST:INSD:BP804167.1,INSD:AV560832.1,INSD:BX838230.1,
INSD:CB253657.1,INSD:DR247573.1,INSD:ES165429.1,
INSD:ES091526.1,INSD:DR247563.1,INSD:DR247570.1,
INSD:BP611193.1,INSD:DR247547.1,INSD:DR247540.1,
INSD:DR247568.1,INSD:DR247565.1,INSD:DR247560.1,
INSD:DR247564.1,INSD:ES099517.1,INSD:BP816244.1,
INSD:ES091024.1,INSD:EL268634.1,INSD:DR247549.1,
INSD:T22797.1,INSD:EL983869.1,INSD:DR247553.1,
INSD:DR247561.1,INSD:DR247571.1,INSD:BX837021.1,
INSD:BP631911.1,INSD:DR247548.1,INSD:ES088658.1,
INSD:CB256079.1,INSD:DR247559.1,INSD:EL324206.1,
INSD:DR247567.1,INSD:DR247556.1,INSD:ES151391.1,
INSD:ES036850.1,INSD:BP816353.1,INSD:CB255188.1,
INSD:ES150913.1,INSD:CB255184.1,INSD:DR247543.1,
INSD:BP828168.1,INSD:DR247542.1,INSD:BP798942.1,
INSD:AV531994.1,INSD:DR247544.1,INSD:DR247551.1,
INSD:DR247539.1,INSD:EL085463.1,INSD:AV543064.1,
INSD:CK120941.1,INSD:DR247545.1,INSD:DR247554.1,
INSD:DR247541.1,INSD:ES023946.1,INSD:DR247557.1,
INSD:DR247562.1,INSD:DR247555.1,INSD:EL995910.1,
INSD:Z46578.1,INSD:EL153491.1,INSD:DR247552.1,
INSD:EL987186.1,INSD:BP826749.1,INSD:DR247566.1,
INSD:ES157247.1,INSD:DR247572.1,INSD:AV567251.1,
INSD:Z46577.1,INSD:DR247546.1,INSD:DR247569.1,
INSD:DR247550.1,INSD:CB253554.1,INSD:AV552463.1,
INSD:ES051703.1,INSD:BP597270.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823832.1,INSD:BT015172.1,INSD:AY062498.1"
/note="Calcium-binding EF-hand family protein; FUNCTIONS
IN: calcium ion binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1,
calcium-binding site (InterPro:IPR018247), EF-HAND 2
(InterPro:IPR018249), EF-hand-like domain
(InterPro:IPR011992), Calcium-binding EF-hand
(InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST
Arabidopsis thaliana protein match is: Calcium-binding
EF-hand family protein (TAIR:AT5G04170.1); Has 38024 Blast
hits to 21889 proteins in 1081 species: Archae - 4;
Bacteria - 4124; Metazoa - 20808; Fungi - 4736; Plants -
4579; Viruses - 288; Other Eukaryotes - 3485 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G10300"
/db_xref="Araport:AT3G10300"
intron_pos 221:1 (1/4)
intron_pos 237:0 (2/4)
intron_pos 295:2 (3/4)
intron_pos 302:0 (4/4)
BEGIN
1 MSGYPPSSQG YGYGGNPPPP QPPYGSTGNN PPPYGSSGSN PPPPYGSSAS SPYAVPYGAQ
61 PAPYGAPPSA PYASLPGDHN KPHKEKPHGA SYGSPSPGGY GAHPSSGPSD YGGYGGAPQQ
121 SGHGGGYGGA PQQSGHGGGY GAPPPQASYG SPFASLVPSA FPPGTDPNIV ACFQAADRDN
181 SGFIDDKELQ GALSSYNQSF SIRTVHLLMY LFTNSNVRKI GPKEFTSLFF SLQNWRSIFE
241 RFDKDRSGRI DTNELRDALM SLGFSVSPVI LDLLVSKFDK SGGRNRAIEY DNFIECCLTV
301 KGLTEKFKEK DTALSGSAIF NYENFMLTVL PFLVA
//