LOCUS AEE74875.1 369 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana lycopene cyclase protein.
ACCESSION CP002686-1785
PROTEIN_ID AEE74875.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="LYC"
/locus_tag="AT3G10230"
/gene_synonym="AtLCY"
/gene_synonym="LYCOPENE BETA-CYCLASE"
/gene_synonym="lycopene cyclase"
/inference="Similar to RNA sequence,
EST:INSD:AV791564.1,INSD:DR219538.1,INSD:Z29210.1,
INSD:AV533950.1,INSD:AV555762.1,INSD:ES098492.1,
INSD:EL120903.1,INSD:EL262035.1,INSD:BP566201.1,
INSD:EL151607.1,INSD:EL106429.1,INSD:EH918663.1,
INSD:EH845378.1,INSD:EH821625.1,INSD:BP569740.1,
INSD:AV811824.1,INSD:BE529093.1,INSD:Z33926.1,
INSD:EH966862.1,INSD:EL082191.1,INSD:BP572565.1,
INSD:BP565845.1,INSD:EL101044.1,INSD:EL268357.1,
INSD:BP569342.1,INSD:N37968.1,INSD:DR375652.1,
INSD:BP564629.1,INSD:EH836064.1,INSD:AV804368.1,
INSD:BP783060.1,INSD:BP579773.1,INSD:EH992147.1,
INSD:BP632191.1,INSD:EL188882.1,INSD:EL316539.1,
INSD:BP786466.1,INSD:EL095062.1,INSD:ES177767.1,
INSD:BP598970.1,INSD:EL146380.1,INSD:BP669118.1,
INSD:EL115513.1,INSD:EH875883.1,INSD:AI995227.1,
INSD:Z29211.1,INSD:BP580336.1,INSD:EG463394.1,
INSD:EL335358.1,INSD:EL141839.1,INSD:F13561.1,
INSD:ES182800.1,INSD:BE528617.1,INSD:CB257629.1,
INSD:EG440310.1,INSD:DR219539.1,INSD:BP792676.1,
INSD:BP573347.1,INSD:EH811620.1,INSD:CB254490.1,
INSD:BX836017.1,INSD:BP586750.1,INSD:BP566600.1,
INSD:BP563873.1,INSD:EH930148.1,INSD:EL223937.1,
INSD:EL226197.1,INSD:EL073694.1,INSD:EH813110.1,
INSD:EH904841.1,INSD:BP622624.1,INSD:EL002646.1,
INSD:AV794138.1,INSD:AA389798.1,INSD:ES006898.1,
INSD:EL036786.1"
/note="lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s:
Lycopene beta/epsilon cyclase (InterPro:IPR008671),
Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST
Arabidopsis thaliana protein match is: Lycopene
beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1114
Blast hits to 1109 proteins in 188 species: Archae - 1;
Bacteria - 220; Metazoa - 0; Fungi - 0; Plants - 356;
Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink)."
/db_xref="TAIR:AT3G10230"
/db_xref="Araport:AT3G10230"
BEGIN
1 MDLLDCLDTT WSGAVVYVDE GVKKDLSRPY GRVNRKQLKS KMLQKCITNG VKFHQSKVTN
61 VVHEEANSTV VCSDGVKIQA SVVLDATGFS RCLVQYDKPY NPGYQVAYGI VAEVDGHPFD
121 VDKMVFMDWR DKHLDSYPEL KERNSKIPTF LYAMPFSSNR IFLEETSLVA RPGLRMEDIQ
181 ERMAARLKHL GINVKRIEED ERCVIPMGGP LPVLPQRVVG IGGTAGMVHP STGYMVARTL
241 AAAPIVANAI VRYLGSPSSN SLRGDQLSAE VWRDLWPIER RRQREFFCFG MDILLKLDLD
301 ATRRFFDAFF DLQPHYWHGF LSSRLFLPEL LVFGLSLFSH ASNTSRLEIM TKGTVPLAKM
361 INNLVQDRD
//