LOCUS AEE74874.1 501 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana lycopene cyclase protein.
ACCESSION CP002686-1784
PROTEIN_ID AEE74874.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="LYC"
/locus_tag="AT3G10230"
/gene_synonym="AtLCY"
/gene_synonym="LYCOPENE BETA-CYCLASE"
/gene_synonym="lycopene cyclase"
/inference="Similar to RNA sequence,
EST:INSD:AV791564.1,INSD:DR219538.1,INSD:AV533950.1,
INSD:EL120903.1,INSD:AV811824.1,INSD:Z33926.1,
INSD:EH966862.1,INSD:BP565845.1,INSD:EL268357.1,
INSD:DR375652.1,INSD:BP564629.1,INSD:DR219540.1,
INSD:BP783060.1,INSD:BP579773.1,INSD:DR219542.1,
INSD:EH992147.1,INSD:EL188882.1,INSD:EL316539.1,
INSD:EG499102.1,INSD:EL095062.1,INSD:ES177767.1,
INSD:BP800603.1,INSD:EL115513.1,INSD:EH875883.1,
INSD:Z29211.1,INSD:AI995227.1,INSD:BP580336.1,
INSD:DR219537.1,INSD:EL335358.1,INSD:EL141839.1,
INSD:ES182800.1,INSD:F13561.1,INSD:BE528617.1,
INSD:DR219539.1,INSD:BP573347.1,INSD:EH811620.1,
INSD:EH807266.1,INSD:BP566600.1,INSD:BP563873.1,
INSD:DR219541.1,INSD:EL223937.1,INSD:EH813110.1,
INSD:EH904841.1,INSD:AV794138.1,INSD:DR219535.1,
INSD:ES006898.1,INSD:EL036786.1,INSD:Z29210.1,
INSD:ES098492.1,INSD:AV555762.1,INSD:Z33983.1,
INSD:EL262035.1,INSD:BP566201.1,INSD:EL151607.1,
INSD:EL106429.1,INSD:EH918663.1,INSD:EH845378.1,
INSD:EL125901.1,INSD:EH821625.1,INSD:BP569740.1,
INSD:BE529093.1,INSD:EH841119.1,INSD:EL082191.1,
INSD:BP800572.1,INSD:BP572565.1,INSD:EL101044.1,
INSD:BP569342.1,INSD:N37968.1,INSD:EH836064.1,
INSD:AV804368.1,INSD:DR219536.1,INSD:BP632191.1,
INSD:BP786466.1,INSD:CA781316.1,INSD:BP598970.1,
INSD:AV825566.1,INSD:EL146380.1,INSD:BP669118.1,
INSD:EG499101.1,INSD:BP847477.1,INSD:EG463394.1,
INSD:EG440310.1,INSD:BP792676.1,INSD:BX836017.1,
INSD:CB254490.1,INSD:BP586750.1,INSD:BP800453.1,
INSD:EH930148.1,INSD:EL226197.1,INSD:EL073694.1,
INSD:EL002646.1,INSD:BP622624.1,INSD:AA389798.1,
INSD:BP867275.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY091396.1,INSD:U50739.1,INSD:AY059749.1,
INSD:L40176.1,INSD:BX823448.1"
/note="lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s:
Lycopene beta/epsilon cyclase (InterPro:IPR008671),
Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST
Arabidopsis thaliana protein match is: Lycopene
beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1445
Blast hits to 1439 proteins in 252 species: Archae - 29;
Bacteria - 306; Metazoa - 0; Fungi - 5; Plants - 374;
Viruses - 0; Other Eukaryotes - 731 (source: NCBI BLink)."
/db_xref="TAIR:AT3G10230"
/db_xref="Araport:AT3G10230"
BEGIN
1 MDTLLKTPNK LDFFIPQFHG FERLCSNNPY HSRVRLGVKK RAIKIVSSVV SGSAALLDLV
61 PETKKENLDF ELPLYDTSKS QVVDLAIVGG GPAGLAVAQQ VSEAGLSVCS IDPSPKLIWP
121 NNYGVWVDEF EAMDLLDCLD TTWSGAVVYV DEGVKKDLSR PYGRVNRKQL KSKMLQKCIT
181 NGVKFHQSKV TNVVHEEANS TVVCSDGVKI QASVVLDATG FSRCLVQYDK PYNPGYQVAY
241 GIVAEVDGHP FDVDKMVFMD WRDKHLDSYP ELKERNSKIP TFLYAMPFSS NRIFLEETSL
301 VARPGLRMED IQERMAARLK HLGINVKRIE EDERCVIPMG GPLPVLPQRV VGIGGTAGMV
361 HPSTGYMVAR TLAAAPIVAN AIVRYLGSPS SNSLRGDQLS AEVWRDLWPI ERRRQREFFC
421 FGMDILLKLD LDATRRFFDA FFDLQPHYWH GFLSSRLFLP ELLVFGLSLF SHASNTSRLE
481 IMTKGTVPLA KMINNLVQDR D
//