LOCUS AEE74815.1 374 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana isocitrate dehydrogenase VI protein.
ACCESSION CP002686-1712
PROTEIN_ID AEE74815.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="IDH-VI"
/locus_tag="AT3G09810"
/gene_synonym="AT3G09805"
/gene_synonym="F8A24.14"
/gene_synonym="F8A24_14"
/gene_synonym="isocitrate dehydrogenase VI"
/inference="Similar to RNA sequence,
EST:INSD:CD531883.1,INSD:CA781615.1,INSD:AV536637.1,
INSD:AV519318.1,INSD:DR272069.1,INSD:BP800957.1,
INSD:EL193402.1,INSD:BP576780.1,INSD:DR272074.1,
INSD:DR272071.1,INSD:EH977828.1,INSD:BE520216.1,
INSD:BP792928.1,INSD:AU226809.1,INSD:DR382252.1,
INSD:DR272072.1,INSD:DR272070.1,INSD:AV439644.1,
INSD:AV540110.1,INSD:AV441931.1,INSD:EH937714.1,
INSD:EL255470.1,INSD:BE520217.1,INSD:BP786270.1,
INSD:DR379253.1,INSD:AV553010.1,INSD:DR272075.1,
INSD:AU236012.1,INSD:EL276450.1,INSD:EL140953.1,
INSD:BP796032.1,INSD:DR272073.1,INSD:BP790611.1,
INSD:ES147948.1,INSD:AV554276.1,INSD:EG510428.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY084425.1,INSD:AF324664.2,INSD:AK228113.1,
INSD:AF327427.1,INSD:AK176269.1,INSD:AF339723.1"
/note="isocitrate dehydrogenase VI (IDH-VI); CONTAINS
InterPro DOMAIN/s: Isocitrate/isopropylmalate
dehydrogenase (InterPro:IPR001804), Isocitrate
dehydrogenase NAD-dependent, mitochondrial
(InterPro:IPR004434), Isocitrate/isopropylmalate
dehydrogenase, conserved site (InterPro:IPR019818); BEST
Arabidopsis thaliana protein match is: isocitrate
dehydrogenase V (TAIR:AT5G03290.1); Has 17175 Blast hits
to 17053 proteins in 2733 species: Archae - 398; Bacteria
- 9669; Metazoa - 935; Fungi - 952; Plants - 360; Viruses
- 0; Other Eukaryotes - 4861 (source: NCBI BLink)."
/db_xref="TAIR:AT3G09810"
/db_xref="Araport:AT3G09810"
intron_pos 65:0 (1/6)
intron_pos 172:0 (2/6)
intron_pos 226:0 (3/6)
intron_pos 251:0 (4/6)
intron_pos 287:2 (5/6)
intron_pos 312:0 (6/6)
BEGIN
1 MTMTAFLARR LIGNGSSQIL GTSSSSSGPF ISVSRAFFSS STPIKATLFP GDGIGPEIAE
61 SVKQVFTAAD VVIDWDEQFV GTEVDPRTNS FLTWDNLQSV LKNKVGLKGP MATPIGKGHR
121 SLNLTLRKEL NLYANVRPCY SLPGYKTRYD DVDLITIREN TEGEYSGLEH QVVKGVVESL
181 KIITRKASMR VAEYAFLYAK THGRKKVSAI HKANIMQKTD GLFLQCCDEV AAKYPEIYYE
241 KVVIDNCCMM LVKNPALFDV LVMPNLYGDI ISDLCAGLVG GLGLTPSMNI GEDGIALAEA
301 VHGSAPDIAG MNLANPTALL LSGVMMLRHL KLNKQAEQIH SAIINTIAEG KYRTADLGGS
361 STTTDFTKAI CDHL
//