LOCUS AEE74738.1 333 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana plastid transcriptionally active 13 protein.
ACCESSION CP002686-1597
PROTEIN_ID AEE74738.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PTAC13"
/locus_tag="AT3G09210"
/gene_synonym="plastid transcriptionally active 13"
/inference="Similar to RNA sequence,
EST:INSD:BP832970.1,INSD:EL165233.1,INSD:DR300106.1,
INSD:DR300111.1,INSD:AV793221.1,INSD:BP858172.1,
INSD:DR300112.1,INSD:EH869639.1,INSD:DR300099.1,
INSD:EL261113.1,INSD:R64754.1,INSD:CK119655.1,
INSD:BP841159.1,INSD:EH801961.1,INSD:EL238493.1,
INSD:DR370609.1,INSD:ES038412.1,INSD:DR300110.1,
INSD:BP624652.1,INSD:DR300105.1,INSD:BP658880.1,
INSD:BP822625.1,INSD:DR300103.1,INSD:EL152080.1,
INSD:BP637015.1,INSD:EL028307.1,INSD:EH825626.1,
INSD:DR300104.1,INSD:EH869829.1,INSD:CB258146.1,
INSD:EH798762.1,INSD:DR300115.1,INSD:DR300097.1,
INSD:DR300098.1,INSD:BP839974.1,INSD:DR300116.1,
INSD:EH852246.1,INSD:DR300113.1,INSD:BP629948.1,
INSD:DR300108.1,INSD:EL157619.1,INSD:EH821092.1,
INSD:BP834749.1,INSD:EL252500.1,INSD:EL244933.1,
INSD:EH925673.1,INSD:EH795540.1,INSD:DR300101.1,
INSD:EH953518.1,INSD:DR300100.1,INSD:DR300109.1,
INSD:DR300107.1,INSD:BP638287.1,INSD:BP813457.1,
INSD:EL033745.1,INSD:EH945828.1,INSD:EL138872.1,
INSD:BP824176.1,INSD:EL078734.1,INSD:BP637261.1,
INSD:BP655926.1,INSD:EL038755.1,INSD:ES178825.1,
INSD:BP667003.1,INSD:DR300114.1,INSD:DR300102.1,
INSD:EH862950.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY049246.1,INSD:AY087753.1,INSD:AY129491.1,
INSD:BX825147.1"
/note="plastid transcriptionally active 13 (PTAC13);
FUNCTIONS IN: transcription elongation regulator activity;
INVOLVED IN: positive regulation of RNA elongation from
RNA polymerase II promoter; LOCATED IN: plastid
chromosome, nucleoid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Translation protein SH3-like
(InterPro:IPR008991), Transcription antitermination
protein, NusG, N-terminal (InterPro:IPR006645),
Translation protein SH3-like, subgroup
(InterPro:IPR014722), KOW (InterPro:IPR005824); Has 3797
Blast hits to 3795 proteins in 1334 species: Archae - 0;
Bacteria - 2562; Metazoa - 0; Fungi - 2; Plants - 31;
Viruses - 0; Other Eukaryotes - 1202 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G09210"
/db_xref="Araport:AT3G09210"
intron_pos 130:0 (1/3)
intron_pos 189:2 (2/3)
intron_pos 307:0 (3/3)
BEGIN
1 MMKLQGGLLQ WSRSSLIPSI YTPINKTQFS IAACVIERNH QLTAKERRQL RNERRESKLG
61 YSWREEVEEK LIKKPKKRYA TWTEELNLDT LAESGPQWWA VRVSRLRGHE TAQILARALA
121 RQFPEMEFTV YAPSVQVKRK LKNGSISVKP KPVFPGCIFI RCILNKEIHD SIRDVDGVGG
181 FIGSKVGNTK RQINKPRPVD DSDLEAIFKQ AKEAQEKADS EFEEADRAEE EASILASQEL
241 LALSNSDVIE TVAESKPKRA PRKATLATET KAKKKKLAAG STVRVLSGTF AEFVGNLKKL
301 NRKTAKATVG FTLFGKETLV EIDINELVPE IQS
//