LOCUS AEE74719.1 896 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana defective in exine formation protein
(DEX1) protein.
ACCESSION CP002686-1575
PROTEIN_ID AEE74719.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="DEX1"
/locus_tag="AT3G09090"
/gene_synonym="DEFECTIVE IN EXINE FORMATION 1"
/inference="Similar to RNA sequence,
EST:INSD:EL074468.1,INSD:EL315595.1,INSD:BP646991.1,
INSD:BP603870.1,INSD:EL331406.1,INSD:AV441214.1,
INSD:EH950857.1,INSD:AU227948.1,INSD:Z26378.1,
INSD:BG459449.1,INSD:Z25577.1,INSD:ES046498.1,
INSD:ES057355.1,INSD:ES032558.1,INSD:AU236941.2,
INSD:EG513344.1,INSD:DR275285.1,INSD:EL341161.1,
INSD:AI997136.1,INSD:ES011656.1,INSD:ES074572.1,
INSD:BP641267.1,INSD:ES052578.1,INSD:BP645046.1,
INSD:EL055840.1,INSD:AV442226.1,INSD:BG459217.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK228583.1,INSD:BX824633.1,INSD:BT005785.1,
INSD:AF257187.1"
/note="DEFECTIVE IN EXINE FORMATION 1 (DEX1); CONTAINS
InterPro DOMAIN/s: FG-GAP (InterPro:IPR013517); Has 2821
Blast hits to 1844 proteins in 419 species: Archae - 49;
Bacteria - 1116; Metazoa - 317; Fungi - 227; Plants - 62;
Viruses - 5; Other Eukaryotes - 1045 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G09090"
/db_xref="Araport:AT3G09090"
intron_pos 43:2 (1/12)
intron_pos 80:2 (2/12)
intron_pos 108:1 (3/12)
intron_pos 147:2 (4/12)
intron_pos 202:1 (5/12)
intron_pos 427:0 (6/12)
intron_pos 450:2 (7/12)
intron_pos 536:1 (8/12)
intron_pos 597:0 (9/12)
intron_pos 691:2 (10/12)
intron_pos 731:0 (11/12)
intron_pos 792:0 (12/12)
BEGIN
1 MKSRARQCLL VCLLCLSLTN LSYGENKFRE RKATDDELGY PDIDEDALLN TQCPKKLELR
61 WQTEVTSSVY ATPLIADINS DGKLDIVVPS FVHYLEVLEG ADGDKMPGWP AFHQSNVHSS
121 PLLFDIDKDG VREIALATYN AEVLFFRVSG FLMSDKLEVP RRKVHKNWHV GLNPDPVDRS
181 HPDVHDDVLE EEAMAMKSST TQTNATTTTP NVTVSMTKEV HGANSYVSTQ EDQKRPENNQ
241 TEAIVKPTPE LHNSSMDAGA NNLAANATTA GSRENLNRNV TTNEVDQSKI SGDKNETVIK
301 LNTSTGNSSE TLGTSGNSST AETVTKSGRR LLEEDGSKES VDSHSDSKDN SEGVRMATVE
361 NDGGLEADAD SSFELLREND ELADEYSYDY DDYVDEKMWG DEEWVEGQHE NSEDYVNIDA
421 HILCTPVIAD IDKDGVQEMI VAVSYFFDPE YYDNPEHLKE LGGIDIKNYI ASSIVVFNLD
481 TKQVKWIKEL DLSTDKANFR AYIYSSPTVV DLDGDGYLDI LVGTSFGLFY AMDHRGNIRE
541 KFPLEMAEIQ GAVVAADIND DGKIELVTTD SHGNIAAWTT QGVEIWEAHL KSLVPQGPSI
601 GDVDGDGHTE VVVPTSSGNI YVLSGKDGSI VRPYPYRTHG RVMNQLLLVD LNKRGEKKKG
661 LTIVTTSFDG YLYLIDGPTS CTDVVDIGET SYSMVLADNV DGGDDLDLIV STMNGNVFCF
721 STPSPHHPLK AWRSSDQGRN NKANRYDREG VFVTHSTRGF RDEEGKNFWA EIEIVDKYRY
781 PSGSQAPYNV TTTLLVPGNY QGERRITQSQ IYDRPGKYRI KLPTVGVRTT GTVMVEMADK
841 NGLHFSDEFS LTFHMYYYKL LKWLLVLPML GMFGLLVILR PQEAVPLPSF SRNTDL
//