LOCUS AEE74696.1 509 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana LMBR1-like membrane protein protein.
ACCESSION CP002686-1533
PROTEIN_ID AEE74696.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G08930"
/inference="Similar to RNA sequence,
EST:INSD:DR272037.1,INSD:BP791443.1,INSD:ES093716.1,
INSD:DR272023.1,INSD:DR271990.1,INSD:DR272057.1,
INSD:DR272006.1,INSD:BP841630.1,INSD:DR272015.1,
INSD:ES185617.1,INSD:DR272046.1,INSD:BP594026.1,
INSD:ES142840.1,INSD:DR272010.1,INSD:BP671209.1,
INSD:DR259011.1,INSD:DR260333.1,INSD:DR271993.1,
INSD:DR272004.1,INSD:EL075834.1,INSD:AV811410.1,
INSD:DR272039.1,INSD:BP790390.1,INSD:AV530601.1,
INSD:DR272050.1,INSD:AI997438.1,INSD:DR272031.1,
INSD:EL299244.1,INSD:ES120429.1,INSD:DR272028.1,
INSD:DR272030.1,INSD:EG514132.1,INSD:BP600244.1,
INSD:AV827929.1,INSD:DR272020.1,INSD:DR272009.1,
INSD:DR259014.1,INSD:EH836970.1,INSD:DR271984.1,
INSD:DR271997.1,INSD:DR378497.1,INSD:DR272053.1,
INSD:BP868337.1,INSD:DR272045.1,INSD:DR272032.1,
INSD:AV799933.1,INSD:DR271980.1,INSD:DR272016.1,
INSD:DR272008.1,INSD:DR272051.1,INSD:DR272043.1,
INSD:EH798099.1,INSD:DR271995.1,INSD:DR272054.1,
INSD:DR272034.1,INSD:BP612111.1,INSD:BP616771.1,
INSD:BP789463.1,INSD:ES181976.1,INSD:DR272052.1,
INSD:DR271998.1,INSD:DR271986.1,INSD:T88089.1,
INSD:DR272021.1,INSD:DR272000.1,INSD:DR271999.1,
INSD:AV828044.1,INSD:EL261098.1,INSD:DR272007.1,
INSD:AA394583.1,INSD:DR272040.1,INSD:ES141404.1,
INSD:DR271983.1,INSD:DR272013.1,INSD:EH979223.1,
INSD:DR271976.1,INSD:BP778666.1,INSD:DR272012.1,
INSD:ES196902.1,INSD:DR271985.1,INSD:CB258755.1,
INSD:DR271974.1,INSD:DR272011.1,INSD:DR272002.1,
INSD:DR272056.1,INSD:DR271982.1,INSD:DR272033.1,
INSD:EL098225.1,INSD:DR259015.1,INSD:BP785767.1,
INSD:DR228184.1,INSD:DR271994.1,INSD:EL107043.1,
INSD:DR271987.1,INSD:DR272048.1,INSD:DR272003.1,
INSD:DR271978.1,INSD:EH878891.1,INSD:BP864624.1,
INSD:ES211573.1,INSD:DR272038.1,INSD:EL131691.1,
INSD:DR259012.1,INSD:DR272035.1,INSD:AV810010.1,
INSD:EL300519.1,INSD:AV549257.1,INSD:AV542232.1,
INSD:AV798779.1,INSD:ES044423.1,INSD:DR272018.1,
INSD:DR272042.1,INSD:DR272055.1,INSD:AV795966.1,
INSD:EL333522.1,INSD:DR228183.1,INSD:DR272022.1,
INSD:DR259016.1,INSD:DR272024.1,INSD:AV537406.1,
INSD:ES019319.1,INSD:DR271996.1,INSD:AV794463.1,
INSD:DR272047.1,INSD:EG493998.1,INSD:DR272044.1,
INSD:DR272005.1,INSD:DR272014.1,INSD:ES161101.1,
INSD:DR271992.1,INSD:DR272027.1,INSD:DR272049.1,
INSD:DR272025.1,INSD:DR272041.1,INSD:DR271981.1,
INSD:DR272019.1,INSD:BP809490.1,INSD:EG514207.1,
INSD:EH826061.1,INSD:DR272001.1,INSD:DR272036.1,
INSD:EH949661.1,INSD:DR271973.1,INSD:DR272017.1,
INSD:EH867168.1,INSD:EL240812.1,INSD:BP614068.1,
INSD:AV548712.1,INSD:AV557265.1,INSD:BP849983.1,
INSD:CB254716.1,INSD:DR271988.1,INSD:EL062831.1,
INSD:BP781189.1,INSD:DR271977.1,INSD:DR271975.1,
INSD:DR271991.1,INSD:AV803434.1,INSD:BP807126.1,
INSD:DR271979.1,INSD:DR272026.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY035091.1,INSD:BT020414.1,INSD:AF083733.1,
INSD:BX825103.1"
/note="LMBR1-like membrane protein; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: LMBR1-like membrane protein, conserved region
(InterPro:IPR006876); BEST Arabidopsis thaliana protein
match is: LMBR1-like membrane protein (TAIR:AT5G01460.1);
Has 384 Blast hits to 384 proteins in 132 species: Archae
- 0; Bacteria - 0; Metazoa - 125; Fungi - 85; Plants - 80;
Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink)."
/db_xref="TAIR:AT3G08930"
/db_xref="Araport:AT3G08930"
intron_pos 117:2 (1/13)
intron_pos 146:1 (2/13)
intron_pos 185:0 (3/13)
intron_pos 222:0 (4/13)
intron_pos 255:0 (5/13)
intron_pos 296:0 (6/13)
intron_pos 317:0 (7/13)
intron_pos 338:2 (8/13)
intron_pos 375:1 (9/13)
intron_pos 413:2 (10/13)
intron_pos 435:2 (11/13)
intron_pos 472:2 (12/13)
intron_pos 495:0 (13/13)
BEGIN
1 MGDFNLALVI VAIVVCVIVF ISSIYLLVNY QHPDDANQAY FPKFVVVFGL SIAMISILML
61 PADVANRHAC RHAIYNGACN LTLPMKDLWL AIYIVDAILV FFVIPFAMFF YEGDQDKTLG
121 KRIKSALIWV VTTAVVCALV LGILYGVIGK VDFSVRHLAS ATSTFPTSWQ FSNTQPCIGN
181 TARQCSAFTA NPTSEKTWTM RTTFPEYVVA LATIVGSVLF TIFGGVGIAC LPLGLITAFI
241 RRPKAVITRS QYIKEATELG KKARELKKAA DGLHQEERSG AKGRKWRKNV KAVEKELLQL
301 EEDVNLLEEM YPQGEQAETA WAFTVLGYLA KFILGIVGLI VSIAWVAHII IYLLVDPPLS
361 PFLNEVFIKL DDVWGLLGTA AFAFFCFYLL LAVIAGAMML GLKLVFITIH PMKWGATLMN
421 SFLFNVGLIL LCSISVIQFC ATAFGYYAQA TAAQEIFGHT LQSLRGIKYL YKYNVFQIGF
481 VILAGLTFLY YIAFGWRRKK TSGRFQLSS
//