LOCUS AEE74672.1 236 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana elongation factor P (EF-P) family
protein protein.
ACCESSION CP002686-1494
PROTEIN_ID AEE74672.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G08740"
/inference="Similar to RNA sequence,
EST:INSD:BP663981.1,INSD:BP793655.1,INSD:EG501701.1,
INSD:AV527003.1,INSD:BP625757.1,INSD:BE038226.1,
INSD:BP850067.1,INSD:BP622860.1,INSD:BP858665.1,
INSD:EH865983.1,INSD:EL019036.1,INSD:CB256945.1,
INSD:AV825008.1,INSD:DR307392.1,INSD:EL010480.1,
INSD:EL201088.1,INSD:EH871082.1,INSD:ES162575.1,
INSD:ES000136.1,INSD:ES127848.1,INSD:DR307404.1,
INSD:EL337269.1,INSD:DR307400.1,INSD:AV789288.1,
INSD:DR307401.1,INSD:DR370325.1,INSD:DR307393.1,
INSD:EL300174.1,INSD:EH890870.1,INSD:ES209622.1,
INSD:DR307395.1,INSD:CB263412.1,INSD:AV520613.1,
INSD:DR307399.1,INSD:BP830614.1,INSD:DR307403.1,
INSD:BP567220.1,INSD:DR307396.1,INSD:ES178378.1,
INSD:DR307405.1,INSD:BP632245.1,INSD:EL307254.1,
INSD:EL137467.1,INSD:Z26736.1,INSD:DR307406.1,
INSD:ES098491.1,INSD:DR307391.1,INSD:EL193061.1,
INSD:BP616033.1,INSD:EL204975.1,INSD:EL272530.1,
INSD:EH800922.1,INSD:EH949260.1,INSD:ES106843.1,
INSD:DR307397.1,INSD:BP618694.1,INSD:EL324856.1,
INSD:EL977837.1,INSD:BP824252.1,INSD:DR307394.1,
INSD:ES149041.1,INSD:AI996109.1,INSD:ES038512.1,
INSD:EL987482.1,INSD:DR307398.1,INSD:EL047667.1,
INSD:BP631670.1,INSD:ES198100.1,INSD:AV789315.1,
INSD:EH881095.1,INSD:EH911687.1,INSD:CB258408.1,
INSD:EL182502.1,INSD:EL070197.1,INSD:CB257615.1,
INSD:EH917219.1,INSD:EL316485.1,INSD:ES148958.1,
INSD:BP664218.1,INSD:ES212013.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY117274.1,INSD:AY063783.1,INSD:AY086204.1"
/note="elongation factor P (EF-P) family protein;
FUNCTIONS IN: translation elongation factor activity;
INVOLVED IN: translational elongation; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Translation elongation factor P
(InterPro:IPR011768), Translation elongation factor
P/YeiP, conserved site (InterPro:IPR013852), Nucleic
acid-binding, OB-fold (InterPro:IPR012340), Translation
elongation factor, KOW-like (InterPro:IPR013185),
Translation protein SH3-like, subgroup
(InterPro:IPR014722), Elongation factor P, C-terminal
(InterPro:IPR015365), Translation protein SH3-like
(InterPro:IPR008991), Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Translation elongation factor
P/YeiP, central (InterPro:IPR001059), Translation
elongation factor P/YeiP (InterPro:IPR020599); BEST
Arabidopsis thaliana protein match is: elongation factor P
(EF-P) family protein (TAIR:AT4G26310.1); Has 10499 Blast
hits to 10498 proteins in 2700 species: Archae - 4;
Bacteria - 7892; Metazoa - 1; Fungi - 0; Plants - 81;
Viruses - 0; Other Eukaryotes - 2521 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G08740"
/db_xref="Araport:AT3G08740"
intron_pos 48:1 (1/6)
intron_pos 75:1 (2/6)
intron_pos 111:0 (3/6)
intron_pos 137:0 (4/6)
intron_pos 171:0 (5/6)
intron_pos 198:1 (6/6)
BEGIN
1 MAGRAIFSVS CSSTPSLCIP YSTASFSSMN RLALPAVRIS PRTNRFPRIH CSMSANDIKA
61 GTNIEVDGAP WRVLEFLHVK PGKGAAFVRT KIRNYVNGST VERTFRAGIS VEEANIYKET
121 KQFTYKDGSQ FVFMDLTTYE ETRLNESDMG EKTKWLKEGM DCILLYWKDK VIDFDLPITV
181 KLKVVDVDPG LRGDTVQGGS KPATMETGAI VAVPLFINVG EEIFVDTRTG AYMNRA
//