LOCUS AEE74647.1 617 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Phototropic-responsive NPH3 family
protein protein.
ACCESSION CP002686-1461
PROTEIN_ID AEE74647.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G08570"
/inference="Similar to RNA sequence, EST:INSD:EL075396.1"
/note="Phototropic-responsive NPH3 family protein;
FUNCTIONS IN: signal transducer activity; INVOLVED IN:
response to light stimulus; LOCATED IN: chloroplast;
EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F
mature embryo stage, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249),
BTB/POZ (InterPro:IPR013069), BTB/POZ fold
(InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210);
BEST Arabidopsis thaliana protein match is:
Phototropic-responsive NPH3 family protein
(TAIR:AT3G08660.1); Has 979 Blast hits to 951 proteins in
48 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi
- 0; Plants - 880; Viruses - 0; Other Eukaryotes - 3
(source: NCBI BLink)."
/db_xref="TAIR:AT3G08570"
/db_xref="Araport:AT3G08570"
intron_pos 29:2 (1/3)
intron_pos 52:0 (2/3)
intron_pos 440:0 (3/3)
BEGIN
1 MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK
61 IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI NFEITISNVV AIRCAAGYLE
121 MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV
181 NACREQLVLG LSRLNRGTES GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES
241 IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301 VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE
361 EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE IAPDPCLSLH KFMALIEILP
421 DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV
481 VRVLYSEQLR MKNVMSGESG EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS
541 RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601 KSRLERKTVR SRPESMF
//