LOCUS AEE74599.1 286 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 3'-5'-exoribonuclease family protein protein.
ACCESSION CP002686-1386
PROTEIN_ID AEE74599.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G07750"
/gene_synonym="MLP3.20"
/inference="Similar to RNA sequence,
EST:INSD:EH809240.1,INSD:BE522829.1,INSD:AI618752.1,
INSD:EL980572.1,INSD:AU231243.1,INSD:DR384181.1,
INSD:EL001469.1,INSD:ES064328.1,INSD:ES009489.1,
INSD:BP855350.1,INSD:ES076263.1,INSD:EL969884.1,
INSD:AU239888.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF325018.2,INSD:AK119005.1,INSD:BT020424.1"
/note="3'-5'-exoribonuclease family protein; FUNCTIONS IN:
3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN:
RNA processing; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Exoribonuclease, phosphorolytic domain 2
(InterPro:IPR015847), Exoribonuclease, phosphorolytic
domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain
2-type fold (InterPro:IPR020568); BEST Arabidopsis
thaliana protein match is: ribonuclease PH45A
(TAIR:AT3G12990.3); Has 1494 Blast hits to 1492 proteins
in 343 species: Archae - 295; Bacteria - 54; Metazoa -
354; Fungi - 315; Plants - 185; Viruses - 0; Other
Eukaryotes - 291 (source: NCBI BLink)."
/db_xref="TAIR:AT3G07750"
/db_xref="Araport:AT3G07750"
intron_pos 42:0 (1/6)
intron_pos 61:0 (2/6)
intron_pos 92:0 (3/6)
intron_pos 118:1 (4/6)
intron_pos 160:0 (5/6)
intron_pos 208:0 (6/6)
BEGIN
1 MGLSLGEQHF IKGGIAQDLR TDGRKRLTYR PIYVETGVIP QANGSARVRI GGTDVIASVK
61 AEIGRPSSLQ PDKGKVAVFI DCSPTAEPTF GGRGGEELSS ELALALQRCL LGGKSGAGAG
121 INLSSLLIKE GKVCWDLYID GLVISSDGNL LDALGAAIKA ALTNTAIPKV NVSAEVADDE
181 QPEIDISDEE YLQFDTSSVP VIVTLTKVGT HYIVDATAEE ESQMSSAVSI SVNRTGHICG
241 LTKRSGSGLD PSVILDMISV AKHVTETLMS KLDSEISAAE ACEDES
//