LOCUS AEE74570.1 114 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Small nuclear ribonucleoprotein family
protein protein.
ACCESSION CP002686-1350
PROTEIN_ID AEE74570.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G07590"
/inference="Similar to RNA sequence,
EST:INSD:DR257309.1,INSD:DR257319.1,INSD:DR257317.1,
INSD:ES154119.1,INSD:DR257316.1,INSD:DR257315.1,
INSD:DR257310.1,INSD:DR257308.1,INSD:ES133314.1,
INSD:DR257305.1,INSD:DR257306.1,INSD:EH880555.1,
INSD:ES046337.1,INSD:CD529959.1,INSD:ES123574.1,
INSD:AV807086.1,INSD:BP645319.1,INSD:DR257307.1,
INSD:DR257318.1,INSD:EL987460.1,INSD:DR257314.1,
INSD:ES164906.1,INSD:BP562114.2,INSD:EL046018.1,
INSD:DR257313.1,INSD:DR257311.1,INSD:EL304935.1,
INSD:DR370584.1,INSD:ES003896.1,INSD:DR257312.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825890.1,INSD:AY069907.1,INSD:AY087568.1"
/note="Small nuclear ribonucleoprotein family protein;
FUNCTIONS IN: molecular_function unknown; LOCATED IN:
nucleus, small nucleolar ribonucleoprotein complex, plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Like-Sm ribonucleoprotein (LSM) domain
(InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)
domain, eukaryotic/archaea-type (InterPro:IPR006649),
Like-Sm ribonucleoprotein (LSM)-related domain
(InterPro:IPR010920); BEST Arabidopsis thaliana protein
match is: Small nuclear ribonucleoprotein family protein
(TAIR:AT4G02840.1); Has 1173 Blast hits to 1172 proteins
in 226 species: Archae - 0; Bacteria - 2; Metazoa - 423;
Fungi - 342; Plants - 215; Viruses - 0; Other Eukaryotes -
191 (source: NCBI BLink)."
/db_xref="TAIR:AT3G07590"
/db_xref="Araport:AT3G07590"
intron_pos 5:2 (1/3)
intron_pos 31:1 (2/3)
intron_pos 95:1 (3/3)
BEGIN
1 MKLVRFLMKL NNETVSIELK NGTVVHGTIT GVDVSMNTHL KTVKMSLKGK NPVTLDHLSL
61 RGNNIRYYIL PDSLNLETLL VEDTPRVKPK KPVAGKAVGR GRGRGRGRGR GRGR
//