LOCUS AEE74545.1 177 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein, putative (
Protein of unknown function, DUF538) protein.
ACCESSION CP002686-1318
PROTEIN_ID AEE74545.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G07460"
/inference="Similar to RNA sequence,
EST:INSD:BP782565.1,INSD:BP848102.1,INSD:EL029864.1,
INSD:EG487172.1,INSD:EH846233.1,INSD:EH962170.1,
INSD:DR324786.1,INSD:EL157609.1,INSD:EH951844.1,
INSD:DR324788.1,INSD:EL104384.1,INSD:EH975192.1,
INSD:BP614616.1,INSD:EL326319.1,INSD:EL232164.1,
INSD:EL196005.1,INSD:EH981863.1,INSD:EL086018.1,
INSD:EH855888.1,INSD:EL113343.1,INSD:BP603424.1,
INSD:AV785120.1,INSD:EH915012.1,INSD:EL282066.1,
INSD:BP867062.1,INSD:EL017978.1,INSD:EL218357.1,
INSD:BP656922.1,INSD:EL046161.1,INSD:EL294470.1,
INSD:BP807290.1,INSD:EL318000.1,INSD:EL008822.1,
INSD:AV526338.1,INSD:EL141110.1,INSD:EH799865.1,
INSD:BP606568.1,INSD:EL219448.1,INSD:EH980895.1,
INSD:EH990536.1,INSD:EL002652.1,INSD:DR373784.1,
INSD:EL084322.1,INSD:BP587836.1,INSD:EG523477.1,
INSD:EL232654.1,INSD:EL037541.1,INSD:EL048025.1,
INSD:EH956202.1,INSD:EL239773.1,INSD:BP860655.1,
INSD:EL221944.1,INSD:EH974846.1,INSD:EL208460.1,
INSD:BP847603.1,INSD:BP867453.1,INSD:EH992384.1,
INSD:N65642.1,INSD:EL107587.1,INSD:EL179280.1,
INSD:BP666520.1,INSD:BP600672.1,INSD:BP614241.1,
INSD:BP863333.1,INSD:EL057980.1,INSD:EH923112.1,
INSD:BP859572.1,INSD:EL261178.1,INSD:EG523476.1,
INSD:EL286586.1,INSD:DR324787.1,INSD:CF773015.1,
INSD:EH842490.1,INSD:EL038245.1,INSD:EG523479.1,
INSD:EL048974.1,INSD:AV543891.1,INSD:EH909782.1,
INSD:EL253314.1,INSD:EL262478.1,INSD:EL240743.1,
INSD:EH911466.1,INSD:EH980458.1,INSD:EH875286.1,
INSD:BP808306.1,INSD:EH944148.1,INSD:EG487171.1,
INSD:EH953302.1,INSD:EL228102.1,INSD:DR324784.1,
INSD:AV552336.1,INSD:EL223121.1,INSD:EH934378.1,
INSD:EG523475.1,INSD:EH985751.1,INSD:DR324789.1,
INSD:EH826887.1,INSD:EL129513.1,INSD:DR324785.1,
INSD:EL271018.1,INSD:BP864541.1,INSD:EL047761.1,
INSD:BP864709.1,INSD:EL222589.1,INSD:BP612259.1,
INSD:EH839624.1,INSD:BP867739.1,INSD:EH843359.1,
INSD:EL154538.1,INSD:AV824008.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY086348.1,INSD:AY128406.1,INSD:BT000087.1"
/note="Protein of unknown function, DUF538; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF538
(InterPro:IPR007493); BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF538
(TAIR:AT3G07470.1); Has 535 Blast hits to 535 proteins in
30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 534; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink)."
/db_xref="TAIR:AT3G07460"
/db_xref="Araport:AT3G07460"
intron_pos 158:0 (1/1)
BEGIN
1 MLRIVQITLL CFVLAAGISI SAVIAENESI DEILLANGLP LGLFPKGVKG FTVNGETGRF
61 SVYLNQSCQA KYETELHYDE IVSGTIGYAQ IRDLSGISAQ ELFLWLQVKG IRVDVPSSGL
121 IFFDVGVLRK QYSLSLFETP RDCVAVRGDA EFIGENKVQS SMLPLYQVDQ TLGRNTV
//