LOCUS AEE74537.1 273 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana auxin-induced in root cultures-like
protein protein.
ACCESSION CP002686-1306
PROTEIN_ID AEE74537.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="AIR12"
/locus_tag="AT3G07390"
/gene_synonym="Auxin-Induced in Root cultures 12"
/inference="Similar to RNA sequence,
EST:INSD:AV822272.1,INSD:EH866844.1,INSD:EL037161.1,
INSD:EH870200.1,INSD:ES046246.1,INSD:ES171000.1,
INSD:DR314238.1,INSD:EL282808.1,INSD:EH824799.1,
INSD:EL983315.1,INSD:ES078983.1,INSD:BP610974.1,
INSD:BP841416.1,INSD:EL183581.1,INSD:ES036157.1,
INSD:ES185772.1,INSD:AV559565.1,INSD:BP655130.1,
INSD:DR348953.1,INSD:EL004978.1,INSD:EH865550.1,
INSD:EL231233.1,INSD:BP827534.1,INSD:EH875615.1,
INSD:BP610187.1,INSD:EG457825.1,INSD:EL024148.1,
INSD:ES035055.1,INSD:BE662789.1,INSD:EH852756.1,
INSD:EL236500.1,INSD:BP790836.1,INSD:EL153504.1,
INSD:EL216134.1,INSD:EG440077.1,INSD:EL315409.1,
INSD:EH901162.1,INSD:EL159845.1,INSD:EL259124.1,
INSD:EL990200.1,INSD:ES165987.1,INSD:ES043061.1,
INSD:EL051611.1,INSD:EL264316.1,INSD:ES069960.1,
INSD:ES164235.1,INSD:EL996371.1,INSD:DR314237.1,
INSD:EH856528.1,INSD:EL277223.1,INSD:ES047440.1,
INSD:EL283379.1,INSD:EL143126.1,INSD:ES202092.1,
INSD:ES142731.1,INSD:AI239396.1,INSD:EL998862.1,
INSD:EL080179.1,INSD:ES138657.1,INSD:ES191302.1,
INSD:ES165703.1,INSD:ES119077.1,INSD:AV531890.1,
INSD:BP566337.1,INSD:EH918419.1,INSD:EL048227.1,
INSD:AV529751.1,INSD:EH936897.1,INSD:BP591422.1,
INSD:CD529401.1,INSD:EG440061.1,INSD:EH880283.1,
INSD:EL990024.1,INSD:BP815922.1,INSD:ES192730.1,
INSD:EH958280.1,INSD:EL247842.1,INSD:ES205698.1,
INSD:DR314240.1,INSD:BP656063.1,INSD:ES178998.1,
INSD:AV557986.1,INSD:EL184730.1,INSD:EH860143.1,
INSD:BP646964.1,INSD:BP650995.1,INSD:EH959939.1,
INSD:EG440060.1,INSD:BP838152.1,INSD:EL071721.1,
INSD:BP585507.1,INSD:EH890583.1,INSD:DR314239.1,
INSD:EL314258.1,INSD:BP839792.1,INSD:EL161317.1,
INSD:ES187316.1,INSD:ES022117.1,INSD:BP818529.1,
INSD:EL986956.1,INSD:EL225827.1,INSD:EL256155.1,
INSD:EL036652.1,INSD:EH837356.1,INSD:ES023831.1,
INSD:ES204543.1,INSD:ES208227.1,INSD:AV782989.1,
INSD:EH938715.1,INSD:BP837827.1,INSD:EL231053.1,
INSD:ES196927.1,INSD:AV560706.1,INSD:EG523206.1,
INSD:BP813826.1,INSD:AA395049.1,INSD:BP825038.1,
INSD:EL304992.1,INSD:BP822274.1,INSD:EG523205.1,
INSD:AI999317.1,INSD:BE662783.1,INSD:EH845494.1,
INSD:ES109153.1,INSD:EG440078.1,INSD:AV789455.1,
INSD:EL050770.1,INSD:ES049391.1,INSD:ES115279.1,
INSD:AI239400.1,INSD:EG499070.1,INSD:AV815584.1,
INSD:DR314236.1,INSD:EH920105.1,INSD:ES212698.1,
INSD:BP825779.1,INSD:EH962820.1,INSD:DR314235.1,
INSD:EL979889.1,INSD:BE038917.1,INSD:AV532319.1,
INSD:EH838004.1,INSD:EL163819.1,INSD:BP812349.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY039908.2,INSD:AY077679.1"
/note="Auxin-Induced in Root cultures 12 (AIR12);
FUNCTIONS IN: extracellular matrix structural constituent;
INVOLVED IN: response to auxin stimulus, lateral root
morphogenesis, extracellular matrix organization; LOCATED
IN: extracellular region, anchored to plasma membrane,
plasma membrane, anchored to membrane; EXPRESSED IN: 26
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF568, DOMON-like (InterPro:IPR007613), DOMON related
(InterPro:IPR005018); BEST Arabidopsis thaliana protein
match is: Auxin-responsive family protein
(TAIR:AT3G25290.2); Has 254 Blast hits to 254 proteins in
21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi -
0; Plants - 248; Viruses - 0; Other Eukaryotes - 4
(source: NCBI BLink)."
/db_xref="TAIR:AT3G07390"
/db_xref="Araport:AT3G07390"
BEGIN
1 MSLCLKIPLI KHQTTPEQNS AMASSSSSLL ILAVACFVSL ISPAISQQAC KSQNLNSAGP
61 FDSCEDLPVL NSYLHYTYNS SNSSLSVAFV ATPSQANGGW VAWAINPTGT KMAGSQAFLA
121 YRSGGGAAPV VKTYNISSYS SLVEGKLAFD FWNLRAESLS GGRIAIFTTV KVPAGADSVN
181 QVWQIGGNVT NGRPGVHPFG PDNLGSHRVL SFTEDAAPGS APSPGSAPAP GTSGSTTPGT
241 AAGGPGNAGS LTRNVNFGVN LGILVLLGSI FIF
//