LOCUS AEE74500.1 207 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L13 family protein protein.
ACCESSION CP002686-1251
PROTEIN_ID AEE74500.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G07110"
/inference="Similar to RNA sequence,
EST:INSD:EL216802.1,INSD:BP826862.1,INSD:EH939775.1,
INSD:EL231534.1,INSD:ES067865.1,INSD:ES075457.1,
INSD:BP800105.1,INSD:EL249996.1,INSD:ES215731.1,
INSD:ES186589.1,INSD:BP865122.1,INSD:BP837912.1,
INSD:EG514128.1,INSD:EH976752.1,INSD:ES140366.1,
INSD:ES143339.1,INSD:EL992029.1,INSD:EL206896.1,
INSD:EL236168.1,INSD:ES114297.1,INSD:EL022352.1,
INSD:ES181524.1,INSD:EL269129.1,INSD:ES150490.1,
INSD:ES015130.1,INSD:BP803780.1,INSD:EH943018.1,
INSD:EL325545.1,INSD:BP578862.1,INSD:ES175050.1,
INSD:EL271152.1,INSD:BP594036.1,INSD:ES058305.1,
INSD:ES204970.1,INSD:EG514095.1,INSD:AV554311.1,
INSD:EH885458.1,INSD:CK121992.1,INSD:ES048673.1,
INSD:EH911300.1,INSD:ES071405.1,INSD:BP827921.1,
INSD:EH890444.1,INSD:ES185804.1,INSD:ES132429.1,
INSD:EL997336.1,INSD:EL036192.1,INSD:ES136279.1,
INSD:EL327105.1,INSD:ES193313.1,INSD:EL070633.1,
INSD:ES098063.1,INSD:BP840292.1,INSD:EL974725.1,
INSD:EL120298.1,INSD:ES168537.1,INSD:ES025351.1,
INSD:EL004999.1,INSD:EG455850.1,INSD:ES069164.1,
INSD:EH918780.1,INSD:ES195831.1,INSD:EH858187.1,
INSD:EL990819.1,INSD:ES084947.1,INSD:ES043463.1,
INSD:ES168765.1,INSD:EL234695.1,INSD:EL218191.1,
INSD:EH886486.1,INSD:EH974535.1,INSD:EL072432.1,
INSD:ES120520.1,INSD:ES017986.1,INSD:ES197721.1,
INSD:EL322562.1,INSD:ES002197.1,INSD:DR367158.1,
INSD:ES152241.1,INSD:ES013935.1,INSD:EL064193.1,
INSD:ES070750.1,INSD:EH923827.1,INSD:EL972072.1,
INSD:EL304857.1,INSD:EG490017.1,INSD:ES114048.1,
INSD:ES088668.1,INSD:EL102276.1,INSD:ES203189.1,
INSD:EL199305.1,INSD:EL987040.1,INSD:EG490016.1,
INSD:AV554426.1,INSD:ES002941.1,INSD:ES205027.1,
INSD:ES052976.1,INSD:ES038325.1,INSD:ES213219.1,
INSD:EL074294.1,INSD:EH890730.1,INSD:ES139760.1,
INSD:EL219021.1,INSD:BP860949.1,INSD:BP801991.1,
INSD:EL174048.1,INSD:EL266978.1,INSD:EL326715.1,
INSD:ES206893.1,INSD:EL985074.1,INSD:ES046238.1,
INSD:EL058873.1,INSD:ES141138.1,INSD:DR367161.1,
INSD:ES078342.1,INSD:EL223147.1,INSD:BP797649.1,
INSD:EL249134.1,INSD:ES167477.1,INSD:ES150638.1,
INSD:AV829538.1,INSD:ES090709.1,INSD:ES000419.1,
INSD:ES005215.1,INSD:EL135839.1,INSD:EL982710.1,
INSD:ES087217.1,INSD:EH826209.1,INSD:EL025343.1,
INSD:EL026667.1,INSD:EH992062.1,INSD:EH970961.1,
INSD:BP797355.1,INSD:ES111608.1,INSD:ES164402.1,
INSD:EL981192.1,INSD:ES136042.1,INSD:ES052133.1,
INSD:CF774416.1,INSD:ES002480.1,INSD:ES055605.1,
INSD:AV551853.1,INSD:EL988065.1,INSD:ES202421.1,
INSD:ES042795.1,INSD:BP849996.1,INSD:EL998395.1,
INSD:ES131467.1,INSD:EL084423.1,INSD:EG513955.1,
INSD:ES144787.1,INSD:BP838819.1,INSD:BP865514.1,
INSD:ES173260.1,INSD:AA042170.1,INSD:ES160805.1,
INSD:AV554544.1,INSD:ES024518.1,INSD:EL327774.1,
INSD:BP798865.1,INSD:ES045833.1,INSD:EH943397.1,
INSD:Z46560.1,INSD:ES030111.1,INSD:ES080930.1,
INSD:ES046407.1,INSD:ES001450.1,INSD:EH920975.1"
/note="Ribosomal protein L13 family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: cytosolic ribosome, cytosolic
large ribosomal subunit, nucleolus, large ribosomal
subunit, membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822),
Ribosomal protein L13, eukaryotic/archaeal
(InterPro:IPR005755); BEST Arabidopsis thaliana protein
match is: Ribosomal protein L13 family protein
(TAIR:AT5G48760.2); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT3G07110"
/db_xref="Araport:AT3G07110"
intron_pos 91:2 (1/3)
intron_pos 130:2 (2/3)
intron_pos 160:0 (3/3)
BEGIN
1 MVSGSGICAK RVVVDARHHM LGRLASVVAK DLLNGQNIVV VRCEEICLSG GLVRQKMKYM
61 RFLRKRMNTK PSHGPIHFRA PSKIFWRTVR GMIPHKTKRG ANALARLKVF EGVPTPYDKI
121 KRMVVPDALK VLRLQAGHKY CLLGRLSSEV GWNHYDTIKQ ELENKRKERA QAVYERKKQL
181 SKLRAKAEKV AEEKLGSQLD VLAPVKY
//