LOCUS AEE74499.1 206 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L13 family protein protein.
ACCESSION CP002686-1252
PROTEIN_ID AEE74499.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G07110"
/inference="Similar to RNA sequence,
EST:INSD:EL216802.1,INSD:ES096111.1,INSD:EH939775.1,
INSD:ES075457.1,INSD:ES179238.1,INSD:EL249996.1,
INSD:ES186589.1,INSD:BP837912.1,INSD:EH976752.1,
INSD:EL992029.1,INSD:ES143339.1,INSD:ES109317.1,
INSD:EL236168.1,INSD:AV564505.1,INSD:EL269129.1,
INSD:ES150490.1,INSD:EL325545.1,INSD:EH943018.1,
INSD:BP617953.1,INSD:EL271152.1,INSD:BP594036.1,
INSD:ES204970.1,INSD:EG514095.1,INSD:EH885458.1,
INSD:BP584414.1,INSD:ES071405.1,INSD:ES185804.1,
INSD:AV554292.1,INSD:EL036192.1,INSD:ES136279.1,
INSD:EL327105.1,INSD:CK117707.1,INSD:EL070633.1,
INSD:EL974725.1,INSD:AV535272.1,INSD:ES093441.1,
INSD:BP571715.1,INSD:ES195831.1,INSD:EH918780.1,
INSD:EL990819.1,INSD:ES084947.1,INSD:AV786101.1,
INSD:ES043463.1,INSD:EL234695.1,INSD:EH886486.1,
INSD:EG518635.1,INSD:EL072432.1,INSD:EL322562.1,
INSD:ES197721.1,INSD:ES152241.1,INSD:ES013935.1,
INSD:EL064193.1,INSD:ES070750.1,INSD:EG490017.1,
INSD:ES114048.1,INSD:ES088668.1,INSD:EL102276.1,
INSD:EL199305.1,INSD:AV790173.1,INSD:BP574733.1,
INSD:EG490016.1,INSD:AV554426.1,INSD:ES002941.1,
INSD:ES213219.1,INSD:EL219021.1,INSD:AV531120.1,
INSD:BP860949.1,INSD:BP801991.1,INSD:BP572122.1,
INSD:BP603594.1,INSD:EG518644.1,INSD:EL174048.1,
INSD:EL326715.1,INSD:EL266978.1,INSD:AA712754.1,
INSD:ES206893.1,INSD:EL985074.1,INSD:ES078342.1,
INSD:BP603119.1,INSD:ES115528.1,INSD:CK120614.1,
INSD:ES090709.1,INSD:ES000419.1,INSD:AV533088.1,
INSD:EL135839.1,INSD:EG518636.1,INSD:EL025343.1,
INSD:EL026667.1,INSD:EH970961.1,INSD:BP797355.1,
INSD:EL340663.1,INSD:AV533893.1,INSD:ES136042.1,
INSD:ES052133.1,INSD:BP591541.1,INSD:CF774416.1,
INSD:AV551853.1,INSD:BP570668.1,INSD:EL988065.1,
INSD:BP658916.1,INSD:ES042795.1,INSD:ES131467.1,
INSD:ES144787.1,INSD:BP838819.1,INSD:EH806844.1,
INSD:ES140818.1,INSD:ES160805.1,INSD:AV554544.1,
INSD:AV541696.1,INSD:ES215984.1,INSD:CK121943.1,
INSD:AV806671.1,INSD:EG518637.1,INSD:AV786543.1,
INSD:AV545559.1,INSD:Z46560.1,INSD:ES030111.1,
INSD:ES080930.1,INSD:EH920975.1,INSD:ES001450.1,
INSD:BP826862.1,INSD:BP573819.1,INSD:EL231534.1,
INSD:ES067865.1,INSD:BP800105.1,INSD:ES215731.1,
INSD:AV787902.1,INSD:BP865122.1,INSD:ES140366.1,
INSD:EG514128.1,INSD:EL206896.1,INSD:ES114297.1,
INSD:BP658045.1,INSD:EL022352.1,INSD:BP565475.1,
INSD:ES181524.1,INSD:BP563202.1,INSD:ES015130.1,
INSD:BP803780.1,INSD:AV566924.1,INSD:ES175050.1,
INSD:AV824423.1,INSD:ES058305.1,INSD:ES183558.1,
INSD:AV554311.1,INSD:AV784866.1,INSD:AV540381.1,
INSD:CK121992.1,INSD:DR367159.1,INSD:ES048673.1,
INSD:EH911300.1,INSD:BP573492.1,INSD:BP827921.1,
INSD:EH890444.1,INSD:ES132429.1,INSD:EL997336.1,
INSD:AA597408.1,INSD:ES193313.1,INSD:ES098063.1,
INSD:BP840292.1,INSD:EL120298.1,INSD:EL004999.1,
INSD:ES025351.1,INSD:ES168537.1,INSD:EG455850.1,
INSD:ES069164.1,INSD:BP566074.1,INSD:DR367160.1,
INSD:AV819769.1,INSD:BP571128.1,INSD:EL970716.1,
INSD:EH858187.1,INSD:BP615744.1,INSD:EL218191.1,
INSD:ES168765.1,INSD:EH974535.1,INSD:ES017986.1,
INSD:ES120520.1,INSD:AV563707.1,INSD:ES002197.1,
INSD:DR367158.1,INSD:EL972072.1,INSD:EL304857.1,
INSD:BP569678.1,INSD:ES203189.1,INSD:EG518634.1,
INSD:ES065886.1,INSD:EL987040.1,INSD:BP578569.1,
INSD:AV823810.1,INSD:BP565658.1,INSD:ES205027.1,
INSD:ES038325.1,INSD:ES052976.1,INSD:AV820291.1,
INSD:BP568990.1,INSD:ES139760.1,INSD:EH890730.1,
INSD:BP574831.1,INSD:AV812806.1,INSD:ES046238.1,
INSD:EL058873.1,INSD:DR367161.1,INSD:BP797649.1,
INSD:EL249134.1,INSD:ES167477.1,INSD:DR367157.1,
INSD:ES126394.1,INSD:ES150638.1,INSD:AV829538.1,
INSD:ES005215.1,INSD:EL982710.1,INSD:ES087217.1,
INSD:EH826209.1,INSD:EG518646.1,INSD:EH992062.1,
INSD:AV527760.1,INSD:ES111608.1,INSD:ES164402.1,
INSD:EL981192.1,INSD:ES140014.1,INSD:BP565881.1,
INSD:CK118147.1,INSD:ES002480.1,INSD:ES055605.1,
INSD:ES202421.1,INSD:BP849996.1,INSD:EL998395.1,
INSD:EL189073.1,INSD:EL084423.1,INSD:EG513955.1,
INSD:BP865514.1,INSD:ES173260.1,INSD:AA042170.1,
INSD:EG518645.1,INSD:ES024518.1,INSD:AV543240.1,
INSD:BP798865.1,INSD:EH943397.1,INSD:ES045833.1,
INSD:AV820484.1,INSD:ES046407.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF325041.2,INSD:BX824368.1,INSD:AY114589.1,
INSD:BX822098.1,INSD:BX822519.1,INSD:BX822336.1,
INSD:AY062793.1,INSD:AY057551.1"
/note="Ribosomal protein L13 family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: in 6 components; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Ribosomal protein L13
(InterPro:IPR005822), Ribosomal protein L13,
eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis
thaliana protein match is: Ribosomal protein L13 family
protein (TAIR:AT5G48760.2); Has 2682 Blast hits to 2682
proteins in 901 species: Archae - 297; Bacteria - 971;
Metazoa - 344; Fungi - 193; Plants - 326; Viruses - 0;
Other Eukaryotes - 551 (source: NCBI BLink)."
/db_xref="TAIR:AT3G07110"
/db_xref="Araport:AT3G07110"
intron_pos 91:2 (1/3)
intron_pos 130:2 (2/3)
intron_pos 160:0 (3/3)
BEGIN
1 MVSGSGICAK RVVVDARHHM LGRLASVVAK DLLNGQNIVV VRCEEICLSG GLVRQKMKYM
61 RFLRKRMNTK PSHGPIHFRA PSKIFWRTVR GMIPHKTKRG ANALARLKVF EGVPTPYDKI
121 KRMVVPDALK VLRLQAGHKY CLLGRLSSEV GWNHYDTIKE LENKRKERAQ AVYERKKQLS
181 KLRAKAEKVA EEKLGSQLDV LAPVKY
//