LOCUS AEE74491.1 405 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Alba DNA/RNA-binding protein protein.
ACCESSION CP002686-1239
PROTEIN_ID AEE74491.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G07030"
/inference="Similar to RNA sequence,
EST:INSD:EL035943.1,INSD:ES167669.1"
/note="Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic
acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST
Arabidopsis thaliana protein match is: Alba
DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast
hits to 441 proteins in 135 species: Archae - 3; Bacteria
- 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses -
0; Other Eukaryotes - 87 (source: NCBI BLink)."
/db_xref="TAIR:AT3G07030"
/db_xref="Araport:AT3G07030"
intron_pos 42:0 (1/7)
intron_pos 69:0 (2/7)
intron_pos 98:2 (3/7)
intron_pos 123:2 (4/7)
intron_pos 155:1 (5/7)
intron_pos 191:0 (6/7)
intron_pos 214:0 (7/7)
BEGIN
1 MDRYQRVAKP KPESPINENE IRITSKGLIR NYISYATSLL QEKSVKDIVL KAMGQAISKT
61 VAISEILKNK IPGLHQDIAI SSISITDVWE PTEEGLFPVE LTRHVSMISI TLSLSELNKD
121 SPGYQAPAQS DQSKPQYQPQ QGRQARLPYN AYGEEGEVVA EGEAGEEVDM ETTKGVMKEK
181 TKGTIKKIIK TMKVGIQTRA EAVDVVDEAM AIVGGRGGYG GGRDGGYGGG RDDGYGERRN
241 DGYGERRNDR YGGGRDDGYG GGRDDGYGGG RNDGYGGRRG GFRGGRGGGR DEGYGGGRGG
301 YGGRSGGQGD GYGGGRGDGY GGGRGDGYGG GRGDGYGGGR VDRYDGGRRD GYGGGRYDGY
361 GGGKSDGYGG GRGGYRGGRG GYGRGRGRMG NGGRSRDGAS NQNEA
//