LOCUS AEE74419.1 221 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002686-1143
PROTEIN_ID AEE74419.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G06590"
/gene_synonym="AIF2"
/gene_synonym="ATBS1 Interacting Factor 2"
/gene_synonym="F5E6.8"
/gene_synonym="F5E6_8"
/gene_synonym="RITF1"
/gene_synonym="RSA1 interacting transcription factor 1"
/inference="Similar to RNA sequence,
EST:INSD:EL989710.1,INSD:EL251947.1,INSD:EL082072.1,
INSD:DR192775.1,INSD:AV832030.1,INSD:DR192778.1,
INSD:EH990722.1,INSD:DR192772.1,INSD:ES142335.1,
INSD:DR192774.1,INSD:ES035239.1,INSD:EL050078.1,
INSD:EL985384.1,INSD:ES195489.1,INSD:EH990715.1,
INSD:EL995962.1,INSD:DR192781.1,INSD:N64946.1,
INSD:EH944485.1,INSD:BP823716.1,INSD:EL064194.1,
INSD:EL043023.1,INSD:AV566602.1,INSD:EH993140.1,
INSD:DR192789.1,INSD:H76964.1,INSD:ES140305.1,
INSD:DR192780.1,INSD:ES134913.1,INSD:EL135917.1,
INSD:DR192777.1,INSD:EL338091.1,INSD:DR192776.1,
INSD:DR192788.1,INSD:EL991135.1,INSD:EL305549.1,
INSD:H76714.1,INSD:EH875864.1,INSD:ES109572.1,
INSD:DR192771.1,INSD:EL975616.1,INSD:ES017868.1,
INSD:EL011737.1,INSD:DR192782.1,INSD:DR192785.1,
INSD:EL998598.1,INSD:ES043347.1,INSD:EL969465.1,
INSD:DR192773.1,INSD:ES011646.1,INSD:EL288650.1,
INSD:ES094403.1,INSD:BP826433.1,INSD:EH944528.1,
INSD:EL992523.1,INSD:EL025703.1,INSD:DR192784.1,
INSD:ES140642.1,INSD:EL982725.1,INSD:EL013257.1,
INSD:ES055072.1,INSD:BP839513.1,INSD:ES116787.1,
INSD:EH958224.1,INSD:DR192783.1,INSD:EL039602.1,
INSD:DR192779.1,INSD:ES174249.1,INSD:AV566811.1,
INSD:DR192786.1,INSD:EL094003.1,INSD:DR192790.1,
INSD:DR192787.1,INSD:BP855302.1,INSD:BP562870.2,
INSD:ES141621.1,INSD:BP820112.1,INSD:EL311650.1,
INSD:EH959454.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX822643.1"
/note="basic helix-loop-helix (bHLH) DNA-binding
superfamily protein; FUNCTIONS IN: sequence-specific DNA
binding transcription factor activity; INVOLVED IN:
regulation of transcription; LOCATED IN: nucleus,
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Helix-loop-helix DNA-binding domain (InterPro:IPR001092),
Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST
Arabidopsis thaliana protein match is: sequence-specific
DNA binding transcription factors (TAIR:AT3G17100.2); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="TAIR:AT3G06590"
/db_xref="Araport:AT3G06590"
BEGIN
1 MASLISDIEP PTSTTSDLVR RKKRSSASSA ASSRSSASSV SGEIHARWRS EKQQRIYSAK
61 LFQALQQVRL NSSASTSSSP TAQKRGKAVR EAADRALAVS ARGRTLWSRA ILANRIKLKF
121 RKQRRPRATM AIPAMTTVVS SSSNRSRKRR VSVLRLNKKS IPDVNRKVRV LGRLVPGCGK
181 QSVPVILEEA TDYIQALEMQ VRAMNSLVQL LSSYGSAPPP I
//