LOCUS AEE74415.1 507 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana poly(A) polymerase 3 protein.
ACCESSION CP002686-1137
PROTEIN_ID AEE74415.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PAPS3"
/locus_tag="AT3G06560"
/gene_synonym="F5E6.11"
/gene_synonym="F5E6_11"
/gene_synonym="poly(A) polymerase 3"
/inference="Similar to RNA sequence,
EST:INSD:BP786579.1,INSD:BP785712.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY323907.1,INSD:AK221644.1"
/note="poly(A) polymerase 3 (PAPS3); FUNCTIONS IN: protein
binding, polynucleotide adenylyltransferase activity;
INVOLVED IN: RNA 3'-end processing, RNA polyadenylation,
transcription; LOCATED IN: cytoplasm; EXPRESSED IN: 7
plant structures; EXPRESSED DURING: L mature pollen stage,
M germinated pollen stage, 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A)
polymerase, central domain (InterPro:IPR007012),
Nucleotidyltransferase, class I, C-terminal-like
(InterPro:IPR011068), Poly(A) polymerase, RNA-binding
domain (InterPro:IPR007010); BEST Arabidopsis thaliana
protein match is: nuclear poly(a) polymerase
(TAIR:AT4G32850.6); Has 776 Blast hits to 768 proteins in
219 species: Archae - 0; Bacteria - 13; Metazoa - 255;
Fungi - 210; Plants - 173; Viruses - 0; Other Eukaryotes -
125 (source: NCBI BLink)."
/db_xref="TAIR:AT3G06560"
/db_xref="Araport:AT3G06560"
intron_pos 10:1 (1/10)
intron_pos 24:0 (2/10)
intron_pos 50:0 (3/10)
intron_pos 86:0 (4/10)
intron_pos 107:0 (5/10)
intron_pos 161:0 (6/10)
intron_pos 199:0 (7/10)
intron_pos 220:0 (8/10)
intron_pos 319:0 (9/10)
intron_pos 374:0 (10/10)
BEGIN
1 MKKGGGRNKG FPQDDESSIS LRQLMVNEGL IPSLEDEVKR RGVINQLRKI VVRWVKNVAW
61 QHRLPQNQID ATNATILPYG SYGLGVYGSE SDIDALCIGP FFASIAEDFF ISLRDMLKSR
121 REVSELHCVK DAKVPLIRFK FDGILVDLPY AQLRVLSIPN NVDVLNPFFL RDIDETSWKI
181 LSGVRANKCI LQLVPSLELF QSLLRCVKLW AKRRGVYGNL NGFLGGVHMA ILAAFVCGYQ
241 PNATLSSLLA NFFYTFAHWQ WPTPVVLLED TYPSTGAPPG LMPIQLPCGS HQYCNSTITR
301 STFYKIVAEF LLGHNLTKDY LKLNFSWKDL FELYPYANTY TWFTKIHLSA ANQEDLSDWV
361 GWVKSRFRCL LIKIEEVYGI CDPNPTEYVE TYTKQPNIVF YWGLQLRTIN VSDIESVKID
421 FLKNVNSGSF RGTVGRIQLT LVKASQLPKN GECGSNNRSK KVTKTCWRIR EDKQCNNVPV
481 YSKHLPGYVV GYQKMVNREA DGMEVKC
//