LOCUS AEE74404.1 622 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Glycosyl hydrolase superfamily protein
protein.
ACCESSION CP002686-1124
PROTEIN_ID AEE74404.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SFR2"
/locus_tag="AT3G06510"
/gene_synonym="ATSFR2"
/gene_synonym="F5E6.16"
/gene_synonym="F5E6_16"
/gene_synonym="SENSITIVE TO FREEZING 2"
/inference="Similar to RNA sequence,
EST:INSD:EG477222.1,INSD:ES107701.1,INSD:EL207697.1,
INSD:AV805051.1,INSD:ES200900.1,INSD:AV797405.1,
INSD:EL290321.1,INSD:AV785662.1,INSD:DR247455.1,
INSD:EL979890.1,INSD:BP595673.1,INSD:BP794785.1,
INSD:AV829154.1,INSD:BP827476.1,INSD:BP648107.1,
INSD:BP778803.1,INSD:AV797171.1,INSD:BP815226.1,
INSD:BP781921.1,INSD:EH870593.1,INSD:AV548508.1,
INSD:AV794899.1,INSD:EL222866.1,INSD:AV795520.1,
INSD:DR247453.1,INSD:EH984904.1,INSD:EL197331.1,
INSD:ES148686.1,INSD:AV791716.1,INSD:EL000189.1,
INSD:AV807075.1,INSD:EL135956.1,INSD:AV811038.1,
INSD:ES082212.1,INSD:AV831248.1,INSD:EH936764.1,
INSD:EH944895.1,INSD:EL277769.1,INSD:EL035196.1,
INSD:ES003291.1,INSD:BP840545.1,INSD:AV829389.1,
INSD:BP629448.1,INSD:ES046984.1,INSD:BP637236.1,
INSD:ES094570.1,INSD:ES091936.1,INSD:ES147843.1,
INSD:AV814508.1,INSD:DR376076.1,INSD:AV816482.1,
INSD:EL329514.1,INSD:BP562443.2,INSD:EL295754.1,
INSD:ES099853.1,INSD:EH841517.1,INSD:EH917064.1,
INSD:CB261348.1,INSD:EG477224.1,INSD:EH846228.1,
INSD:BP835969.1,INSD:BP819076.1,INSD:BP793717.1,
INSD:BP792577.1,INSD:BP792215.1,INSD:EL139473.1,
INSD:BP846281.2,INSD:AV796151.1,INSD:AV814601.1,
INSD:ES020415.1,INSD:AV794172.1,INSD:BP782682.1,
INSD:EL284659.1,INSD:EH823089.1,INSD:BP788615.1,
INSD:EH919108.1,INSD:BP792437.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY142552.1,INSD:AJ491321.1,INSD:AJ491320.1,
INSD:AJ491322.1,INSD:AY087713.1,INSD:BT002100.1,
INSD:AF219380.1,INSD:AY059889.1"
/note="SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN:
beta-glucosidase activity, hydrolase activity, hydrolyzing
O-glycosyl compounds; INVOLVED IN: response to freezing;
LOCATED IN: chloroplast outer membrane, chloroplast,
chloroplast envelope; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Glycoside hydrolase, family 1
(InterPro:IPR001360), Glycoside hydrolase, family 1,
active site (InterPro:IPR018120), Glycoside hydrolase,
catalytic core (InterPro:IPR017853), Glycoside hydrolase,
subgroup, catalytic core (InterPro:IPR013781); BEST
Arabidopsis thaliana protein match is: beta glucosidase 27
(TAIR:AT3G60120.1); Has 11582 Blast hits to 10595 proteins
in 1458 species: Archae - 144; Bacteria - 8179; Metazoa -
842; Fungi - 193; Plants - 1310; Viruses - 0; Other
Eukaryotes - 914 (source: NCBI BLink)."
/db_xref="TAIR:AT3G06510"
/db_xref="Araport:AT3G06510"
intron_pos 55:1 (1/9)
intron_pos 147:2 (2/9)
intron_pos 194:0 (3/9)
intron_pos 249:2 (4/9)
intron_pos 323:2 (5/9)
intron_pos 380:0 (6/9)
intron_pos 458:0 (7/9)
intron_pos 508:0 (8/9)
intron_pos 551:1 (9/9)
BEGIN
1 MELFALLIKV AGLLATVTVG ANVVSYSRFR RQNLAKFRSP IDESKEVLAD FNSIEHEEGK
61 FFFGLATAPA HAEDDLDDAW LQFAKETPCS AEEAEAADKK ARRKKVKLAV GAITKGLAKN
121 THGKEDKNAA DKPPSKNVAA WHNAPHAEDR LKFWSDPDKE VKLAKDTGVT VFRMGVDWSR
181 IMPVEPTKGI KEAVNYEAVE HYKWILKKVR SNGMKVMLTL FHHSLPPWAA DYGGWKMEKT
241 VDYFMDFTRI VVDSMYDLVD SWVTFNEPHI FTMLTYMCGS WPGNNPDFLE IATSTLPMGV
301 FHRALHWMAV AHSKAYDYIH GKISLKKPLV GVAHHVSFMR PYGLFDIGAV TISNSLTIFP
361 YIDSICEKLD FIGINYYGQE AVCGAGLKLV ETDEYSESGR GVYPDGLYRV LLMFHERYKH
421 LKVPFIVTEN GVSDETDVIR RPYLIEHLLA LYAAMLKGVP VLGYIFWTIS DNWEWADGYG
481 PKFGLVAVDR SHDLARTLRQ SYHLFSKIVK SGKVTRKDRS LAWNELQKAA KAGKLRPFYR
541 GVDNHNLMYA DGLDKPQWRP FVDRDWRFGH YQMDGLQDPL SRVARTLLIW PLIMKKRIRK
601 VKIKHTDDAG LVLHPALASP FD
//