LOCUS AEE74391.1 486 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-1104
PROTEIN_ID AEE74391.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PPR2"
/locus_tag="AT3G06430"
/gene_synonym="AtPPR2"
/gene_synonym="EMB2750"
/gene_synonym="embryo defective 2750"
/gene_synonym="F24P17.10"
/gene_synonym="F24P17_10"
/gene_synonym="pentatricopeptide repeat 2"
/inference="Similar to RNA sequence,
EST:INSD:EH953017.1,INSD:EL029377.1,INSD:EL026716.1,
INSD:EL206362.1,INSD:EL089047.1,INSD:EH832949.1,
INSD:EL199159.1,INSD:AV797177.1,INSD:AV811332.1,
INSD:DR236817.1,INSD:BX839671.1,INSD:EH809608.1,
INSD:EH841340.1,INSD:EL071628.1,INSD:ES056390.1,
INSD:BP562253.1,INSD:EH859907.1,INSD:AV826894.1,
INSD:EH930956.1,INSD:ES043867.1,INSD:EL060433.1,
INSD:EL068098.1,INSD:EH797927.1,INSD:ES138371.1,
INSD:ES068377.1,INSD:EL227518.1,INSD:EL338950.1,
INSD:EL001025.1,INSD:EL187645.1,INSD:BP621458.1,
INSD:EH806235.1,INSD:EL237254.1,INSD:EH809711.1,
INSD:EL081504.1,INSD:EL144827.1,INSD:ES061138.1,
INSD:EL223760.1,INSD:EL222987.1,INSD:BP856062.1,
INSD:EL116422.1,INSD:AV796724.1,INSD:EL022889.1,
INSD:EL087862.1,INSD:EH938458.1,INSD:EL206209.1,
INSD:N96404.1,INSD:EH974914.1,INSD:CB261934.1,
INSD:EL025240.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY099616.1,INSD:BT006618.1"
/note="embryo defective 2750 (EMB2750); INVOLVED IN:
pollen tube development, embryo development ending in seed
dormancy; LOCATED IN: chloroplast; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
Tetratricopeptide repeat (TPR)-like superfamily protein
(TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins
in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288;
Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes
- 1132 (source: NCBI BLink)."
/db_xref="TAIR:AT3G06430"
/db_xref="Araport:AT3G06430"
intron_pos 110:0 (1/1)
BEGIN
1 MASMSLSFSS SLCSSRIPEG KRRFRHRDVG IVRCVLAASK SSPGSVTKKR LWKDGEFPGI
61 TEPVNQRRTP IKNVKKKLDR RSKANGWVNT VTETLSDLIA KKQWLQALEV FDMLREQTFY
121 QPKEGTYMKL LVLLGKSGQP NRAQKLFDEM LEEGLEPTVE LYTALLAAYT RSNLIDDAFS
181 ILDKMKSFPQ CQPDVFTYST LLKACVDASQ FDLVDSLYKE MDERLITPNT VTQNIVLSGY
241 GRVGRFDQME KVLSDMLVST ACKPDVWTMN IILSVFGNMG KIDMMESWYE KFRNFGIEPE
301 TRTFNILIGS YGKKRMYDKM SSVMEYMRKL EFPWTTSTYN NIIEAFADVG DAKNMELTFD
361 QMRSEGMKAD TKTFCCLING YANAGLFHKV ISSVQLAAKF EIPENTAFYN AVISACAKAD
421 DLIEMERVYI RMKERQCVCD SRTFEIMVEA YEKEGMNDKI YYLEQERQKL MDRTVATKEM
481 ENLPAG
//