LOCUS AEE74384.1 380 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tubby-like protein 9 protein.
ACCESSION CP002686-1096
PROTEIN_ID AEE74384.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="TLP9"
/locus_tag="AT3G06380"
/gene_synonym="ATTLP9"
/gene_synonym="F24P17.15"
/gene_synonym="F24P17_15"
/gene_synonym="tubby-like protein 9"
/inference="Similar to RNA sequence,
EST:INSD:EH921669.1,INSD:EL216867.1,INSD:ES183292.1,
INSD:AV521502.1,INSD:EL328170.1,INSD:EL984942.1,
INSD:ES167846.1,INSD:ES152965.1,INSD:T44322.1,
INSD:EH934870.1,INSD:EL979544.1,INSD:ES189361.1,
INSD:AU228207.1,INSD:ES122895.1,INSD:EL152209.1,
INSD:EH955596.1,INSD:EH981063.1,INSD:EL150290.1,
INSD:AI993972.1,INSD:BX838835.1,INSD:BU636137.1,
INSD:ES084774.1,INSD:EL178299.1,INSD:EL090194.1,
INSD:ES097816.1,INSD:EH957276.1,INSD:AV527654.1,
INSD:AA597550.1,INSD:BP818134.1,INSD:AU237181.1,
INSD:BE526338.1,INSD:BE523610.1,INSD:AV566002.1,
INSD:BX837992.1,INSD:ES161456.1,INSD:Z46592.1,
INSD:ES131236.1,INSD:BX834829.1,INSD:T44750.1,
INSD:ES018370.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822204.1,INSD:BX824160.1,INSD:BX824384.1,
INSD:BX822936.1,INSD:AF487270.1,INSD:BT026465.1"
/note="tubby-like protein 9 (TLP9); CONTAINS InterPro
DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810),
F-box domain, Skp2-like (InterPro:IPR022364), Tubby,
C-terminal, conserved site (InterPro:IPR018066), Tubby,
C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana
protein match is: tubby like protein 11
(TAIR:AT5G18680.1); Has 949 Blast hits to 946 proteins in
117 species: Archae - 0; Bacteria - 0; Metazoa - 350;
Fungi - 19; Plants - 465; Viruses - 0; Other Eukaryotes -
115 (source: NCBI BLink)."
/db_xref="TAIR:AT3G06380"
/db_xref="Araport:AT3G06380"
intron_pos 98:0 (1/4)
intron_pos 127:1 (2/4)
intron_pos 170:2 (3/4)
intron_pos 226:2 (4/4)
BEGIN
1 MTFRSLLQEM RSRPHRVVHA AASTANSSDP FSWSELPEEL LREILIRVET VDGGDWPSRR
61 NVVACAGVCR SWRILTKEIV AVPEFSSKLT FPISLKQSGP RDSLVQCFIK RNRNTQSYHL
121 YLGLTTSLTD NGKFLLAASK LKRATCTDYI ISLRSDDISK RSNAYLGRMR SNFLGTKFTV
181 FDGSQTGAAK MQKSRSSNFI KVSPRVPQGS YPIAHISYEL NVLGSRGPRR MRCIMDTIPM
241 SIVESRGVVA STSISSFSSR SSPVFRSHSK PLRSNSASCS DSGNNLGDPP LVLSNKAPRW
301 HEQLRCWCLN FHGRVTVASV KNFQLVAVSD CEAGQTSERI ILQFGKVGKD MFTMDYGYPI
361 SAFQAFAICL SSFETRIACE
//