LOCUS AEE74377.1 363 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002686-1083
PROTEIN_ID AEE74377.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G06330"
/gene_synonym="F24P17.21"
/gene_synonym="F24P17_21"
/inference="Similar to RNA sequence,
EST:INSD:BP832568.1,INSD:EL094524.1,INSD:EG524886.1,
INSD:DR339480.1,INSD:T44675.1,INSD:AV812181.1,
INSD:EL330904.1,INSD:EL026157.1,INSD:DR339485.1,
INSD:EL243287.1,INSD:AV830588.1,INSD:ES172386.1,
INSD:EL244415.1,INSD:EL302244.1,INSD:DR339481.1,
INSD:DR339479.1,INSD:BP821272.1,INSD:BP851019.1,
INSD:EG524885.1,INSD:DR339483.1,INSD:EL325808.1,
INSD:DR339488.1,INSD:DR339487.1,INSD:DR339482.1,
INSD:EL157734.1,INSD:CF773514.1,INSD:DR339484.1,
INSD:BX837527.1,INSD:DR339489.1,INSD:BP670237.1,
INSD:DR339486.1"
/note="RING/U-box superfamily protein; CONTAINS InterPro
DOMAIN/s: Zinc finger, C3HC4 RING-type
(InterPro:IPR018957), Zinc finger, RING-CH-type
(InterPro:IPR011016); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT5G18760.1); Has 1679 Blast hits to 1519 proteins
in 179 species: Archae - 0; Bacteria - 0; Metazoa - 662;
Fungi - 124; Plants - 642; Viruses - 4; Other Eukaryotes -
247 (source: NCBI BLink)."
/db_xref="TAIR:AT3G06330"
/db_xref="Araport:AT3G06330"
intron_pos 31:0 (1/5)
intron_pos 162:0 (2/5)
intron_pos 197:1 (3/5)
intron_pos 301:2 (4/5)
intron_pos 326:0 (5/5)
BEGIN
1 MKMQDSAAQE PEIAIIVGDS SSSSLHSSSQ VTEKSTEDVP SCSHLDLSIQ IPSRSLPFGN
61 GRNPKGSLKS TPSFKSGTTS SPRGILRNLS LKKKVISQPE SERSSLLSPG LMETAKKPNA
121 TGSTTSPYWK RCLSLPSRQA AKLSPVVSTQ LSAGVPGDPP NKDYSRSLSM PGRNKVIVRS
181 ISFDNHKARV SSETSADQVS SVPPEETDEE IPEEEAVCRI CLDVCEEGNT LKMECSCKGD
241 LRLVHEACAM KWFSTKGTRT CDVCRQVVQN LPVTLVRVPT PNQQNNRRGS SQQNMPSQTV
301 SAWQEFVVLV LISTVCYFFF LEQLLIRDLN KQAIYIAAPF SLTLGLLASI FAIVLGIQNH
361 SPS
//