LOCUS AEE74334.1 186 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L12/ ATP-dependent
Clp protease adaptor protein ClpS family protein protein.
ACCESSION CP002686-1024
PROTEIN_ID AEE74334.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G06040"
/gene_synonym="F24F17.2"
/gene_synonym="F24F17_2"
/inference="Similar to RNA sequence,
EST:INSD:EL294617.1,INSD:ES024738.1,INSD:EL311539.1,
INSD:BP819431.1,INSD:EL288333.1,INSD:ES031822.1,
INSD:DR381790.1,INSD:EL044043.1,INSD:AV787650.1,
INSD:EL970831.1,INSD:EL238377.1,INSD:ES035689.1,
INSD:EL991366.1,INSD:EL979506.1,INSD:DR347052.1,
INSD:ES143772.1,INSD:ES043043.1,INSD:ES189964.1,
INSD:BP655790.1,INSD:AV824552.1,INSD:BP798165.1,
INSD:ES144436.1,INSD:ES011834.1,INSD:DR347053.1,
INSD:CB264828.1,INSD:AV552004.1,INSD:EL994284.1,
INSD:ES034941.1,INSD:EL984811.1,INSD:ES211030.1,
INSD:BP834498.2,INSD:ES013452.1,INSD:EL241917.1,
INSD:AV542170.1,INSD:EL177654.1,INSD:AV786619.1,
INSD:ES208715.1,INSD:EH903703.1,INSD:EL993866.1,
INSD:ES208850.1,INSD:ES004351.1,INSD:ES017258.1,
INSD:EL134239.1,INSD:EH857538.1,INSD:ES088207.1,
INSD:BP610803.1,INSD:AI995493.1,INSD:ES131793.1,
INSD:DR371393.1,INSD:ES011706.1,INSD:EL111572.1,
INSD:ES006902.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY063991.1,INSD:AY096690.1"
/note="Ribosomal protein L12/ ATP-dependent Clp protease
adaptor protein ClpS family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: ribosome, intracellular, large
ribosomal subunit; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Ribosomal protein L12, chloroplast
(InterPro:IPR015608), Ribosomal protein L7/L12,
C-terminal/adaptor protein ClpS-like (InterPro:IPR014719),
Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823);
BEST Arabidopsis thaliana protein match is: Ribosomal
protein L7/L12, oligomerisation;Ribosomal protein L7/L12,
C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2);
Has 8332 Blast hits to 8332 proteins in 2728 species:
Archae - 0; Bacteria - 5601; Metazoa - 194; Fungi - 132;
Plants - 253; Viruses - 0; Other Eukaryotes - 2152
(source: NCBI BLink)."
/db_xref="TAIR:AT3G06040"
/db_xref="Araport:AT3G06040"
BEGIN
1 MKLISLVRNV RSRQCQPEVI WSVQVRFLQQ DSVSKAKPKK YKYPSVYDPY GPRPQPSSKI
61 MELAERIAAL SPEERKQIGP ALNEHLRLPK QQMISSDGIG AKQDTGAGNV EEKKEKTAFD
121 VKLEKFNASD KIKVIKEVRT FTSLGLKEAK ELVEKVPAIL KQGVTKEEAN EIIAKIKAVG
181 GIAVME
//