LOCUS AEE74329.1 1102 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SNF2/Brahma-type chromatin-remodeling
protein CHR12 protein.
ACCESSION CP002686-1019
PROTEIN_ID AEE74329.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ATCHR12"
/locus_tag="AT3G06010"
/gene_synonym="CHR12"
/gene_synonym="chromatin remodeling 12"
/gene_synonym="F2O10.3"
/gene_synonym="F2O10_3"
/inference="Similar to RNA sequence,
EST:INSD:CF773200.1,INSD:EL339897.1,INSD:EL309949.1,
INSD:CB518237.1,INSD:ES194695.1,INSD:ES172454.1,
INSD:ES014504.1,INSD:EG527132.1,INSD:EL132952.1,
INSD:EH831617.1,INSD:EL141335.1,INSD:ES072896.1,
INSD:EH917455.1,INSD:EH798539.1,INSD:ES069030.1,
INSD:ES083262.1,INSD:EG527134.1,INSD:ES164690.1,
INSD:EL031854.1,INSD:EL027919.1,INSD:EL999523.1"
/note="ATCHR12; FUNCTIONS IN: helicase activity, DNA
binding, nucleic acid binding, ATP binding; INVOLVED IN:
response to water deprivation, response to salt stress,
response to heat; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like
helicase, N-terminal (InterPro:IPR014001), DNA/RNA
helicase, C-terminal (InterPro:IPR001650), Helicase,
superfamily 1/2, ATP-binding domain (InterPro:IPR014021),
SNF2-related (InterPro:IPR000330); BEST Arabidopsis
thaliana protein match is: Homeotic gene regulator
(TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins
in 2220 species: Archae - 141; Bacteria - 6122; Metazoa -
5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other
Eukaryotes - 4904 (source: NCBI BLink)."
/db_xref="TAIR:AT3G06010"
/db_xref="Araport:AT3G06010"
intron_pos 73:0 (1/11)
intron_pos 124:1 (2/11)
intron_pos 146:0 (3/11)
intron_pos 209:0 (4/11)
intron_pos 259:0 (5/11)
intron_pos 391:0 (6/11)
intron_pos 477:2 (7/11)
intron_pos 550:2 (8/11)
intron_pos 620:0 (9/11)
intron_pos 671:1 (10/11)
intron_pos 873:1 (11/11)
BEGIN
1 MVAQQLQERC GGTSQEDPVE TTKSLICALN YISRDLPLPP HLFTAVSSIY HGASSSSLSD
61 SDVSPPLPTS PPANKAPYGA DLMGEFEDAL LKQRPDCESG SRLIQLLDNR NKSHIQRRLS
121 ELEELPSTRG EDLQAKCLLE LYGLKLRELQ GKVRTAVSSE FWLRLNCADV SSQVFDWGMM
181 RLPRPFYGVG DPFAMEADDQ FRKKRDAERL SRLEEEEKNL IETAKRKFFA EVLNAVREFQ
241 LQIQATQKRR RQRNDGVQAW HGRQRQRATR AEKLRLMALK SDDQEAYMKL VKESKNERLT
301 TLLEETNKLL ANLGAAVQRQ KDAKLPEGID LLKDSESDLS ELDAPRSEPL QDLLPDQDID
361 ITESDNNDDS NDLLEGQRQY NSAIHSIQEK VTEQPSLLEG GELRSYQLEG LQWMVSLFNN
421 NLNGILADEM GLGKTIQTIS LIAYLLENKG VPGPYLIVAP KAVLPNWVNE FATWVPSIAA
481 FLYDGRLEER KAIREKIAGE GKFNVLITHY DLIMRDKAFL KKIEWYYMIV DEGHRLKNHE
541 SALAKTLLTG YRIKRRLLLT GTPIQNSLQE LWSLLNFLLP HIFNSVQNFE EWFNAPFADR
601 GNVSLTDEEE LLIIHRLHHV IRPFILRRKK DEVEKFLPGK TQVILKCDMS AWQKVYYKQV
661 TDMGRVGLQT GSGKSKSLQN LTMQLRKCCN HPYLFVGGDY NMWKKPEIVR ASGKFELLDR
721 LLPKLRKAGH RILLFSQMTR LIDVLEIYLT LNDYKYLRLD GTTKTDQRGL LLKQFNEPDS
781 PYFMFLLSTR AGGLGLNLQT ADTVIIFDSD WNPQMDQQAE DRAHRIGQKK EVRVFVLVSV
841 GSVEEVILER AKQKMGIDAK VIQAGLFNTT STAQDRREML EEIMRKGTSS LGTDVPSERE
901 INRLAARSED EFWMFERMDE ERRRKENYRA RLMQEQEVPE WAYTTQTQEE KLNNGKFHFG
961 SVTGKRKRKE IVYSDTLSEL QWLKAVESGE DLSKLSMRYN RREENASNTK TSTSKKVIES
1021 IQTVSDGTSE EDEEEQEEER AKEMSGKQRV DKSEEEEEEG EEENDGKAIF KWNTHKKKRS
1081 RYSFTCSSSD SRAQSSNGSR RK
//