LOCUS AEE74282.1 330 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana syntaxin of plants 43 protein.
ACCESSION CP002686-950
PROTEIN_ID AEE74282.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SYP43"
/locus_tag="AT3G05710"
/gene_synonym="ATSYP43"
/gene_synonym="F18C1.2"
/gene_synonym="F18C1_2"
/gene_synonym="syntaxin of plants 43"
/inference="Similar to RNA sequence,
EST:INSD:EH819577.1,INSD:DR224213.1,INSD:ES204366.1,
INSD:EH837174.1,INSD:ES145359.1,INSD:EL051166.1,
INSD:BP798538.1,INSD:BP600598.1,INSD:EL108828.1,
INSD:ES151357.1,INSD:BP865502.1,INSD:BP564752.1,
INSD:EG492985.1,INSD:ES147705.1,INSD:EL331343.1,
INSD:ES130031.1,INSD:EL184896.1,INSD:ES155406.1,
INSD:DR224215.1,INSD:EH961098.1,INSD:DR224217.1,
INSD:EH895053.1,INSD:AV816189.1,INSD:DR224218.1,
INSD:EL998185.1,INSD:BP785504.1,INSD:ES204219.1,
INSD:EG492996.1,INSD:BP564010.1,INSD:ES101187.1,
INSD:EL995755.1,INSD:DR224216.1,INSD:BP802413.1,
INSD:BP579525.1,INSD:EL995179.1,INSD:ES201510.1,
INSD:EH864683.1,INSD:DR224212.1,INSD:AV830966.1,
INSD:BP662148.1,INSD:BP575490.1,INSD:EL149731.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AJ245408.1,INSD:AY088000.1"
/note="syntaxin of plants 43 (SYP43); FUNCTIONS IN: SNAP
receptor activity; INVOLVED IN: intracellular protein
transport, cellular membrane fusion; LOCATED IN: membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE
coiled-coil domain (InterPro:IPR000727), t-SNARE
(InterPro:IPR010989), Syntaxin/epimorphin, conserved site
(InterPro:IPR006012), Syntaxin, N-terminal
(InterPro:IPR006011); BEST Arabidopsis thaliana protein
match is: syntaxin of plants 41 (TAIR:AT5G26980.2); Has
2057 Blast hits to 2057 proteins in 255 species: Archae -
6; Bacteria - 12; Metazoa - 861; Fungi - 474; Plants -
365; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G05710"
/db_xref="Araport:AT3G05710"
intron_pos 75:2 (1/7)
intron_pos 167:0 (2/7)
intron_pos 197:0 (3/7)
intron_pos 221:0 (4/7)
intron_pos 247:0 (5/7)
intron_pos 269:0 (6/7)
intron_pos 296:0 (7/7)
BEGIN
1 MATRNRTLLF RKYRNSLRSV RAPMGSSSSS TLTEHNSLTG AKSGLGPVIE MASTSLLNPN
61 RSYAPVSTED PGNSRGTITV GLPPDWVDVS EEISVYIQRA RTKMAELGKA HAKALMPSFG
121 DGKEDQHQIE TLTQEVTFLL KKSEKQLQRL SAAGPSEDSN VRKNVQRSLA TDLQNLSMEL
181 RKKQSTYLKR LRLQKEDGAD LEMNLNGSRY KAEDDDFDDM VFSEHQMSKI KKSEEISIER
241 EKEIQQVVES VSELAQIMKD LSALVIDQGT IVDRIDYNIQ NVASTVDDGL KQLQKAERTQ
301 RQGGMVMCAS VLVILCFIML VLLILKEILL
//