LOCUS AEE74205.1 410 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nucleotide repair protein protein.
ACCESSION CP002686-844
PROTEIN_ID AEE74205.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ERCC1"
/locus_tag="AT3G05210"
/gene_synonym="T12H1.18"
/gene_synonym="T12H1_18"
/gene_synonym="UV REPAIR DEFICIENT 7"
/gene_synonym="UVR7"
/inference="Similar to RNA sequence,
EST:INSD:DR378677.1,INSD:EL974217.1,INSD:BP803205.1,
INSD:AV555305.1,INSD:AV803547.1,INSD:EL970600.1,
INSD:BP800921.1,INSD:CK119950.1,INSD:DR274851.1,
INSD:AV823330.1,INSD:CK121827.1,INSD:DR274850.1,
INSD:ES096535.1,INSD:CK120975.1,INSD:BP866874.1,
INSD:BP800923.1,INSD:AV535929.1,INSD:EH991480.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823090.1,INSD:AY116935.1,INSD:AY088915.1,
INSD:AY050335.1,INSD:AF276082.1"
/note="ERCC1; FUNCTIONS IN: 5'-flap endonuclease activity;
INVOLVED IN: in 6 processes; LOCATED IN: nucleus;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Helix-hairpin-helix DNA-binding motif, class 1
(InterPro:IPR003583), DNA repair protein rad10
(InterPro:IPR004579), RuvA domain 2-like
(InterPro:IPR010994); Has 658 Blast hits to 452 proteins
in 188 species: Archae - 0; Bacteria - 4; Metazoa - 166;
Fungi - 153; Plants - 44; Viruses - 0; Other Eukaryotes -
291 (source: NCBI BLink)."
/db_xref="TAIR:AT3G05210"
/db_xref="Araport:AT3G05210"
intron_pos 95:2 (1/8)
intron_pos 133:0 (2/8)
intron_pos 167:2 (3/8)
intron_pos 201:0 (4/8)
intron_pos 226:2 (5/8)
intron_pos 260:0 (6/8)
intron_pos 284:0 (7/8)
intron_pos 307:0 (8/8)
BEGIN
1 MANEDDDGEK SRSLHQQIAR KPKTQIVIGV PSYQEVLESS QTKSTPPSLF KPSQSFSQAF
61 AFVKSSDVYS PPPPSSAAAS SSQPSGASQV PHSSSQTHQT DGASSSSTPV ATGSVPSNTT
121 QNRNAILVSH RQKGNPLLKH IRNVKWVFSD IIPDYVLGQN SCALYLSLRY HLLHPDYLYF
181 RIRELQKNFK LSVVLCHVDV EDTVKPLLEV TKTALLHDCT LLCAWSMTEC ARYLETIKVY
241 ENKPADLIQG QMDTDYLSRL NHSLTSIRHV NKSDVVTLGS TFGSLAHIID ASMEDLARCP
301 GIGERKVKRL YDTFHEPFKR ATSSYPSVVE PPIPEAPVEK DVNSEEPVEE DEDFVEDSRK
361 RKKKEPEPEK TVKTALSAVF ARYSDRLSKK KEKQKEKDTT TASDAETHQN
//