LOCUS AEE74204.1 398 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002686-843
PROTEIN_ID AEE74204.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ATL6"
/locus_tag="AT3G05200"
/gene_synonym="Arabidopsis toxicos en levadura 6"
/gene_synonym="T12H1.17"
/gene_synonym="T12H1_17"
/inference="Similar to RNA sequence,
EST:INSD:EH835592.1,INSD:BP813234.1,INSD:EL287704.1,
INSD:BE662696.1,INSD:EL300669.1,INSD:EL068937.1,
INSD:BP665842.1,INSD:DR750829.1,INSD:EL074431.1,
INSD:EL302599.1,INSD:BX837535.1,INSD:BX838250.1,
INSD:AV795165.1,INSD:BP579153.1,INSD:AV552773.1,
INSD:EH931104.1,INSD:AU227127.1,INSD:EH984248.1,
INSD:EL219861.1,INSD:BP603467.1,INSD:T43796.1,
INSD:ES033387.1,INSD:EL031476.1,INSD:EL155568.1,
INSD:BP855148.1,INSD:BP644231.1,INSD:EL340667.1,
INSD:DR358887.1,INSD:BX834459.1,INSD:EL017797.1,
INSD:BP606864.1,INSD:DR750830.1,INSD:EH853070.1,
INSD:AV826488.1,INSD:BP582086.1,INSD:BX838854.1"
/inference="Similar to RNA sequence,
mRNA:INSD:DQ086860.1,INSD:BX823157.1,INSD:BX823829.1,
INSD:AY080617.1,INSD:BX824905.1,INSD:AF132016.1,
INSD:BX822958.1"
/note="ATL6; FUNCTIONS IN: zinc ion binding; INVOLVED IN:
response to chitin; LOCATED IN: plasma membrane; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 12 growth
stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type
(InterPro:IPR001841), Zinc finger, C3HC4 RING-type
(InterPro:IPR018957); BEST Arabidopsis thaliana protein
match is: carbon/nitrogen insensitive 1
(TAIR:AT5G27420.1); Has 9947 Blast hits to 9919 proteins
in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2610;
Fungi - 790; Plants - 5036; Viruses - 50; Other Eukaryotes
- 1461 (source: NCBI BLink)."
/db_xref="TAIR:AT3G05200"
/db_xref="Araport:AT3G05200"
BEGIN
1 MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL
61 FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL DVSVVETFPT FLYSDVKTQK
121 LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG
181 ESVEPGGTEP DLELQQVVVN PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT
241 TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301 SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW
361 RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
//