LOCUS AEE74181.1 533 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NOP56-like pre RNA processing ribonucleoprotein
protein.
ACCESSION CP002686-812
PROTEIN_ID AEE74181.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G05060"
/inference="Similar to RNA sequence,
EST:INSD:BP633585.1,INSD:BP778018.1,INSD:EG488653.1,
INSD:BU635296.1,INSD:BP569376.1,INSD:DR355800.1,
INSD:EH977048.1,INSD:BP633584.1,INSD:BP564673.1,
INSD:AI998474.1,INSD:EL334100.1,INSD:ES081628.1,
INSD:BP792926.1,INSD:DR355801.1,INSD:BP783842.1,
INSD:BP575715.1,INSD:BP792005.1,INSD:ES023529.1,
INSD:EL984112.1,INSD:EL983846.1,INSD:BP571109.1,
INSD:F15123.1,INSD:BP782045.1,INSD:ES200727.1,
INSD:EL973401.1,INSD:ES004136.1,INSD:AV815599.1,
INSD:BP563578.1,INSD:BP564002.1,INSD:ES001217.1,
INSD:EL026659.1,INSD:ES107359.1,INSD:AV824788.1,
INSD:AV831378.1,INSD:AV787695.1,INSD:ES029483.1,
INSD:EL997164.1,INSD:ES035602.1,INSD:EL992075.1,
INSD:EH942616.1,INSD:BP862296.2,INSD:BP569534.1,
INSD:ES106954.1,INSD:ES035330.1,INSD:EL968082.1,
INSD:BP791026.1,INSD:BP851408.1,INSD:BE037630.1,
INSD:ES048053.1,INSD:ES208283.1,INSD:ES056525.1,
INSD:AV831246.1,INSD:EH835633.1,INSD:BP782619.1,
INSD:ES037682.1,INSD:AV815937.1,INSD:EL086047.1,
INSD:EL181071.1,INSD:BP563365.1,INSD:DR383600.1,
INSD:EL162883.1,INSD:ES069003.1,INSD:BP585481.1,
INSD:DR235035.1,INSD:BP585469.1,INSD:ES102834.1,
INSD:EG488655.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF302491.1,INSD:AY060573.1,INSD:AF412080.1,
INSD:AK220645.1"
/note="NOP56-like pre RNA processing ribonucleoprotein;
FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process
unknown; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pre-mRNA processing
ribonucleoprotein, snoRNA-binding domain
(InterPro:IPR002687), NOP5, N-terminal
(InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST
Arabidopsis thaliana protein match is: NOP56-like pre RNA
processing ribonucleoprotein (TAIR:AT5G27120.1); Has 39712
Blast hits to 18529 proteins in 1244 species: Archae -
275; Bacteria - 3520; Metazoa - 14574; Fungi - 4183;
Plants - 1688; Viruses - 262; Other Eukaryotes - 15210
(source: NCBI BLink)."
/db_xref="TAIR:AT3G05060"
/db_xref="Araport:AT3G05060"
intron_pos 28:0 (1/7)
intron_pos 42:0 (2/7)
intron_pos 102:0 (3/7)
intron_pos 157:0 (4/7)
intron_pos 224:0 (5/7)
intron_pos 390:0 (6/7)
intron_pos 435:0 (7/7)
BEGIN
1 MVLVLYETAA GFALFKVKDE GKMANVEDLC KEFDTPDSAR KMVKLKAFEK FDNTSEALEA
61 VAKLLEGAPS KGLRKFLKAN CQGETLAVAD SKLGNVIKEK LKIDCIHNNA VMELLRGVRS
121 QFTELISGLG DQDLAPMSLG LSHSLARYKL KFSSDKVDTM IIQAIGLLDD LDKELNTYAM
181 RVREWYGWHF PELAKIISDN ILYAKSVKLM GNRVNAAKLD FSEILADEIE ADLKDAAVIS
241 MGTEVSDLDL LHIRELCDQV LSLSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLISH
301 GGSLLNLSKQ PGSTVQILGA EKALFRALKT KHATPKYGLI FHASLVGQAA PKHKGKISRS
361 LAAKTVLAIR VDALGDSQDN TMGLENRAKL EARLRNLEGK DLGRLSGSSK GKPKIEVYNK
421 DKKMGSGGLI TPAKTYNTAA DSLLGETSAK SEEPSKKKDK KKKKKVEEEK PEEEEPSEKK
481 KKKKAEAETE AVVEVAKEEK KKNKKKRKHE EEETTETPAK KKDKKEKKKK SKD
//