LOCUS AEE74149.1 558 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zeta-carotene desaturase protein.
ACCESSION CP002686-766
PROTEIN_ID AEE74149.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ZDS"
/locus_tag="AT3G04870"
/gene_synonym="PDE181"
/gene_synonym="PIGMENT DEFECTIVE EMBRYO 181"
/gene_synonym="PRE ZETA-CAROTENE DESATURASE PRECURSOR"
/gene_synonym="SPC1"
/gene_synonym="SPONTANEOUS CELL DEATH 1"
/gene_synonym="T9J14.18"
/gene_synonym="zeta-carotene desaturase"
/inference="Similar to RNA sequence,
EST:INSD:AV562591.1,INSD:BP587993.1,INSD:EL295510.1,
INSD:EH895885.1,INSD:AV440858.1,INSD:EL089244.1,
INSD:EL078959.1,INSD:DR373433.1,INSD:AA394651.1,
INSD:ES208814.1,INSD:ES045897.1,INSD:BP639919.1,
INSD:EH827015.1,INSD:ES051204.1,INSD:BP574787.1,
INSD:AV801312.1,INSD:AV788036.1,INSD:BP637996.1,
INSD:EL047540.1,INSD:ES080165.1,INSD:EH890219.1,
INSD:BP571718.1,INSD:EL006515.1,INSD:EH958564.1,
INSD:AV564720.1,INSD:BP617931.1,INSD:T88256.1,
INSD:EH937346.1,INSD:AV521471.1,INSD:EH984860.1,
INSD:EL330923.1,INSD:BP571728.1,INSD:EH977646.1,
INSD:BP664317.1,INSD:CK121810.1,INSD:BP785118.1,
INSD:BP587097.1,INSD:EH841321.1,INSD:EL052768.1,
INSD:CK121156.1,INSD:ES109508.1,INSD:ES197346.1,
INSD:BP582194.1,INSD:BP563732.1,INSD:EL006443.1,
INSD:AV805108.1,INSD:AV809500.1,INSD:DR380036.1,
INSD:ES077313.1,INSD:BP668462.1,INSD:BP566773.1,
INSD:AV797978.1,INSD:EH888934.1,INSD:EL258600.1,
INSD:AV796264.1,INSD:EL154843.1,INSD:CD530688.1,
INSD:EL165946.1,INSD:EL113800.1,INSD:DR320560.1,
INSD:BP604547.1,INSD:BP563223.1,INSD:EL148438.1,
INSD:EH991663.1,INSD:AV813291.1,INSD:AA394476.1,
INSD:BP646986.1,INSD:BP564818.1,INSD:EL119483.1,
INSD:EL085607.1,INSD:EL293713.1,INSD:EL051184.1,
INSD:BP576196.1,INSD:EL260607.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT015591.1,INSD:AY096583.1,INSD:BX823903.1"
/note="zeta-carotene desaturase (ZDS); FUNCTIONS IN:
carotene 7,8-desaturase activity; INVOLVED IN: carotene
biosynthetic process; LOCATED IN: chloroplast; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Amine oxidase
(InterPro:IPR002937), Adrenodoxin reductase
(InterPro:IPR000759), Carotene 7,8-desaturase
(InterPro:IPR014103); BEST Arabidopsis thaliana protein
match is: phytoene desaturase 3 (TAIR:AT4G14210.1); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="TAIR:AT3G04870"
/db_xref="Araport:AT3G04870"
intron_pos 40:1 (1/12)
intron_pos 82:0 (2/12)
intron_pos 127:0 (3/12)
intron_pos 151:1 (4/12)
intron_pos 176:0 (5/12)
intron_pos 211:0 (6/12)
intron_pos 292:2 (7/12)
intron_pos 322:0 (8/12)
intron_pos 388:2 (9/12)
intron_pos 431:2 (10/12)
intron_pos 456:0 (11/12)
intron_pos 511:0 (12/12)
BEGIN
1 MASSVVFAAT GSLSVPPLKS RRFYVNSSLD SDVSDMSVNA PKGLFPPEPV PYKGPKLKVA
61 IIGAGLAGMS TAVELLDQGH EVDIYDSRTF IGGKVGSFVD RRGNHIEMGL HVFFGCYNNL
121 FRLMKKVGAE KNLLVKDHTH TFINKDGTIG ELDFRFPVGA PIHGIRAFLV TNQLKPYDKL
181 RNSLALALSP VVKALVDPDG AMRDIRNLDS ISFSDWFLSK GGTRASIQRM WDPVAYALGF
241 IDCDNMSARC MLTIFSLFAT KTEASLLRML KGSPDVYLSG PIKQYITDRG GRIHLRWGCR
301 EILYDKSADG ETYVTGLAIS KATNKKIVKA DVYVAACDVP GIKRLLPKEW RESRFFNDIY
361 ELEGVPVVTV QLRYNGWVTE LQDIELARQL KRAVGLDNLL YTPDADFSCF ADLALASPAD
421 YYIEGQGTLL QCVLTPGDPY MRMPNDKIIE KVAMQVTELF PSSRGLEVTW SSVVKIAQSL
481 YREAPGKDPF RPDQKTPIKN FFLAGSYTKQ DYIDSMEGAT LSGRQASSYI CDAGEELAEL
541 NKKLSSSATA VPDELSLV
//