LOCUS AEE74135.1 176 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana PITH domain protein (DUF1000) protein.
ACCESSION CP002686-749
PROTEIN_ID AEE74135.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G04780"
/gene_synonym="F7O18.27"
/gene_synonym="F7O18_27"
/inference="Similar to RNA sequence,
EST:INSD:EL266355.1,INSD:AV813650.1,INSD:AV821027.1,
INSD:BP844127.1,INSD:EL993608.1,INSD:EH820891.1,
INSD:EL994932.1,INSD:BP563259.1,INSD:DR370722.1,
INSD:DR310902.1,INSD:EH918840.1,INSD:ES018089.1,
INSD:EG479485.1,INSD:ES103011.1,INSD:EG499333.1,
INSD:EG463104.1,INSD:EL994620.1,INSD:DR215658.1,
INSD:EL214191.1,INSD:ES076603.1,INSD:DR215661.1,
INSD:EH962281.1,INSD:EH846561.1,INSD:BP578085.1,
INSD:DR215662.1,INSD:BP602418.1,INSD:EL139216.1,
INSD:Z18398.1,INSD:DR215660.1,INSD:ES089662.1,
INSD:AV792043.1,INSD:DR215659.1,INSD:ES022230.1,
INSD:EH921241.1,INSD:EL266434.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY093713.1,INSD:AY088225.1,INSD:AY058116.1"
/note="CONTAINS InterPro DOMAIN/s: Thioredoxin, core
(InterPro:IPR015467), Proteasome-interacting
thioredoxin-like domain, C-terminal (InterPro:IPR010400);
BEST Arabidopsis thaliana protein match is: Protein of
unknown function (DUF1000) (TAIR:AT2G25950.1); Has 606
Blast hits to 606 proteins in 196 species: Archae - 0;
Bacteria - 0; Metazoa - 245; Fungi - 186; Plants - 75;
Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink)."
/db_xref="TAIR:AT3G04780"
/db_xref="Araport:AT3G04780"
intron_pos 14:0 (1/7)
intron_pos 43:0 (2/7)
intron_pos 84:1 (3/7)
intron_pos 100:2 (4/7)
intron_pos 120:0 (5/7)
intron_pos 135:2 (6/7)
intron_pos 161:2 (7/7)
BEGIN
1 MSAESASQIP KGQVDLLDFI DWSGVECLNQ SSSHSLPNAL KQGYREDEGL NLESDADEQL
61 LIYIPFNQVI KLHSFAIKGP EEEGPKTVKF FSNKEHMCFS NVNDFPPSDT AELTEENLKG
121 KPVVLKYVKF QNVRSLTIFI EANQSGSEVT KVQKIALYGS TVETTDMKGL KKIEDH
//