LOCUS AEE74119.1 444 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana CLP-similar protein 3 protein.
ACCESSION CP002686-734
PROTEIN_ID AEE74119.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CLPS3"
/locus_tag="AT3G04680"
/gene_synonym="CLP-similar protein 3"
/gene_synonym="F7O18.15"
/gene_synonym="F7O18_15"
/inference="Similar to RNA sequence,
EST:INSD:AV811311.1,INSD:EL018329.1,INSD:ES073169.1,
INSD:ES086297.1,INSD:ES091756.1,INSD:ES121764.1,
INSD:ES205225.1,INSD:ES036483.1,INSD:AV815100.1,
INSD:ES192586.1,INSD:ES161252.1,INSD:EH971658.1,
INSD:EH918812.1,INSD:ES052332.1,INSD:ES050159.1,
INSD:ES026968.1,INSD:EL297720.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822685.1,INSD:AY128751.1,INSD:BX825423.1,
INSD:BX822498.1"
/note="CLP-similar protein 3 (CLPS3); CONTAINS InterPro
DOMAIN/s: Pre-mRNA cleavage complex II Clp1
(InterPro:IPR010655); BEST Arabidopsis thaliana protein
match is: CLP1-similar protein 5 (TAIR:AT5G39930.1); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="TAIR:AT3G04680"
/db_xref="Araport:AT3G04680"
intron_pos 75:0 (1/7)
intron_pos 98:0 (2/7)
intron_pos 130:0 (3/7)
intron_pos 210:2 (4/7)
intron_pos 257:0 (5/7)
intron_pos 321:0 (6/7)
intron_pos 400:2 (7/7)
BEGIN
1 MAYGGPSMNP PALSGAVPGS ANLKQVKLER ESELRIEVSE EPLRLRVVNG TAEIFGSELP
61 PEIWRTFPPR MKFAVFTWYG ATIEMDGVTE TDYTADETPM VSYINVHAIL DARRRFAKAS
121 TSNDPESSQG PRVIVVGPTD SGKSTLTKML LSWAAKQGWR PTFVDLDVGQ GSITIPGSIA
181 AAPIEMPLDP VEGFPLDMAL VYYYGHASPN MNVELYKALV KELAQVLEKQ FVGNPESRAA
241 GMVINTMGWI EGIGYELLLH AIDTFNASVV LVLGQEKLFS RLKDVLRSKS NVDVVKLHKS
301 GGVVARVKEV RKRSRNFKIQ EYFYGLSKEL SPYANTSSFS DLQVFRIGGG PQAPKSALPA
361 GSTSVSNPLR VTPVNIDDRD LLHSVLAVSY AEEPDQIISS NVSGFVYVTE VNVQKKKITY
421 LAPSPGTLPS KLLVAGSLAW LESV
//