LOCUS AEE74116.1 330 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana WRKY DNA-binding protein 39 protein.
ACCESSION CP002686-730
PROTEIN_ID AEE74116.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="WRKY39"
/locus_tag="AT3G04670"
/gene_synonym="ATWRKY39"
/gene_synonym="F7O18.30"
/gene_synonym="F7O18_30"
/gene_synonym="WRKY DNA-binding protein 39"
/gene_synonym="WRKY DNA-BINDING PROTEIN 39"
/inference="Similar to RNA sequence,
EST:INSD:BP793367.1,INSD:EH841617.1,INSD:BP800766.1,
INSD:ES072072.1,INSD:EH952646.1,INSD:ES007166.1,
INSD:EL120690.1,INSD:EH977357.1,INSD:DN604696.1,
INSD:EL169309.1,INSD:ES119734.1,INSD:EH918290.1,
INSD:AV827358.1,INSD:EH914237.1,INSD:EH829094.1,
INSD:AV820065.1,INSD:DR751465.1,INSD:BP584439.1,
INSD:AV540585.1,INSD:ES205581.1,INSD:ES106576.1,
INSD:BP568700.1,INSD:BP789030.1,INSD:EL280811.1,
INSD:EH798898.1,INSD:AV555683.1,INSD:BP853801.1,
INSD:DR751282.1,INSD:AV831643.1,INSD:AV560485.1,
INSD:AV797964.1,INSD:BP829068.1,INSD:BP851790.1,
INSD:AV542366.1,INSD:BP568416.1,INSD:EL259134.1,
INSD:BP810568.1,INSD:BP654874.1,INSD:EH829744.1,
INSD:ES075756.1,INSD:AV561493.1,INSD:DR356435.1,
INSD:EL128433.1,INSD:EL075102.1,INSD:ES102555.1,
INSD:BP850811.1,INSD:BP647070.1,INSD:ES002656.1,
INSD:ES023379.1,INSD:ES067316.1,INSD:AV815116.1,
INSD:ES111406.1,INSD:DR382731.1,INSD:BP844730.1,
INSD:ES106855.1,INSD:EL015885.1,INSD:DR751453.1,
INSD:AV811785.1,INSD:BP779362.1,INSD:EL273073.1,
INSD:EL983437.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF404860.1,INSD:AY053420.1,INSD:BX823790.1,
INSD:AY133586.1"
/note="WRKY DNA-binding protein 39 (WRKY39); FUNCTIONS IN:
calmodulin binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription, DNA-dependent, regulation of transcription;
LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657),
Transcription factor, WRKY, Zn-cluster
(InterPro:IPR018872); BEST Arabidopsis thaliana protein
match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1);
Has 3371 Blast hits to 2926 proteins in 187 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
3355; Viruses - 0; Other Eukaryotes - 16 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G04670"
/db_xref="Araport:AT3G04670"
intron_pos 240:2 (1/2)
intron_pos 282:2 (2/2)
BEGIN
1 MEEVEAANRS AIESCHGVLN LLSQRTSDPK SLTVETGEVV SKFKRVASLL TRGLGHGKFR
61 STNKFRSSFP QHIFLESPIC CGNDLSGDYT QVLAPEPLQM VPASAVYNEM EPKHQLGHPS
121 LMLSHKMCVD KSFLELKPPP FRAPYQLIHN HQQIAYSRSN SGVNLKFDGS GSSCYTPSVS
181 NGSRSFVSSL SMDASVTDYD RNSFHLTGLS RGSDQQHTRK MCSGSLKCGS RSKCHCSKKR
241 KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301 RCIDETSMLI VTYEGEHNHS RILSSQSAHT
//