LOCUS AEE74102.1 411 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana AT hook motif DNA-binding family
protein protein.
ACCESSION CP002686-713
PROTEIN_ID AEE74102.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G04590"
/gene_synonym="AHL14"
/gene_synonym="AT-hook motif nuclear localized protein 14"
/gene_synonym="F7O18.6"
/gene_synonym="F7O18_6"
/inference="Similar to RNA sequence,
EST:INSD:AV544298.1,INSD:EL183851.1,INSD:EH913424.1,
INSD:EH914106.1,INSD:EL200025.1,INSD:AV442341.1,
INSD:ES061255.1,INSD:EL284663.1,INSD:BU635143.1,
INSD:EG513056.1,INSD:AV440938.1,INSD:AV552802.1,
INSD:ES045502.1,INSD:BE039313.1,INSD:EH935166.1,
INSD:EL190835.1,INSD:AV781865.1,INSD:AV549191.1,
INSD:EL167683.1,INSD:AV821422.1,INSD:BX840094.1,
INSD:ES062937.1,INSD:BX839174.1,INSD:BP601912.1,
INSD:EL006061.1,INSD:BP621599.1,INSD:BP615966.1,
INSD:BP602005.1,INSD:AV520595.1,INSD:BX840091.1,
INSD:BP779533.1,INSD:EG524758.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX824040.1,INSD:BT029764.1"
/note="AT hook motif DNA-binding family protein; FUNCTIONS
IN: DNA binding; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif
(InterPro:IPR017956); BEST Arabidopsis thaliana protein
match is: DNA-binding family protein (TAIR:AT5G28590.1);
Has 3387 Blast hits to 3069 proteins in 223 species:
Archae - 0; Bacteria - 59; Metazoa - 1696; Fungi - 298;
Plants - 799; Viruses - 15; Other Eukaryotes - 520
(source: NCBI BLink)."
/db_xref="TAIR:AT3G04590"
/db_xref="Araport:AT3G04590"
intron_pos 165:1 (1/5)
intron_pos 183:0 (2/5)
intron_pos 227:0 (3/5)
intron_pos 278:0 (4/5)
intron_pos 393:1 (5/5)
BEGIN
1 MDPNESHHHH QQQQLHHLHQ QQQQQQQQQR LTSPYFHHQL QHHHHLPTTV ATTASTGNAV
61 PSSNNGLFPP QPQPQHQPND GSSSLAVYPH SVPSSAVTAP MEPVKRKRGR PRKYVTPEQA
121 LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP
181 GEDVVQKIMM FANQSKHELC VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR
241 TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301 SNSGSRLTSP VSSGQLLGMG FPPGMESTGR NPMRGNDEQH DHHHHQAGLG GPHHFMMQAP
361 QGIHMTHSRP SEWRGGGNSG HDGRGGGGYD LSGRIGHESS ENGDYEQQIP D
//