LOCUS AEE74058.1 910 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana plastid transcriptionally active 3 protein.
ACCESSION CP002686-647
PROTEIN_ID AEE74058.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PTAC3"
/locus_tag="AT3G04260"
/gene_synonym="PDE324"
/gene_synonym="PIGMENT DEFECTIVE 324"
/gene_synonym="plastid transcriptionally active 3"
/gene_synonym="T6K12.12"
/gene_synonym="T6K12_12"
/inference="Similar to RNA sequence,
EST:INSD:EL086552.1,INSD:DR355378.1,INSD:EH916737.1,
INSD:EH838762.1,INSD:EG497076.1,INSD:EL280745.1,
INSD:EL244136.1,INSD:EL038368.1,INSD:EH875103.1,
INSD:EH984268.1,INSD:EL310565.1,INSD:EL194780.1,
INSD:EL309097.1,INSD:DR232833.1,INSD:EL213847.1,
INSD:EL265132.1,INSD:EH902957.1,INSD:EH916892.1,
INSD:AI998049.1,INSD:EL244204.1,INSD:ES053097.1,
INSD:EG497075.1,INSD:EH977858.1,INSD:EL137943.1,
INSD:ES164808.1,INSD:EL131831.1"
/note="plastid transcriptionally active 3 (PTAC3);
FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED
IN: plastid chromosome, nucleus, chloroplast, nucleoid,
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
DNA-binding SAP (InterPro:IPR003034); BEST Arabidopsis
thaliana protein match is: genomes uncoupled 1
(TAIR:AT2G31400.1); Has 11987 Blast hits to 8407 proteins
in 477 species: Archae - 24; Bacteria - 285; Metazoa -
3588; Fungi - 1065; Plants - 3982; Viruses - 208; Other
Eukaryotes - 2835 (source: NCBI BLink)."
/db_xref="TAIR:AT3G04260"
/db_xref="Araport:AT3G04260"
intron_pos 128:0 (1/12)
intron_pos 185:1 (2/12)
intron_pos 258:0 (3/12)
intron_pos 278:1 (4/12)
intron_pos 302:2 (5/12)
intron_pos 328:2 (6/12)
intron_pos 381:1 (7/12)
intron_pos 437:2 (8/12)
intron_pos 592:0 (9/12)
intron_pos 734:0 (10/12)
intron_pos 802:0 (11/12)
intron_pos 846:2 (12/12)
BEGIN
1 MSLLFLNPPF PSNSIHPIPR RAAGISSIRC SISAPEKKPR RRRKQKRGDG AENDDSLSFG
61 SGEAVSALER SLRLTFMDEL MERARNRDTS GVSEVIYDMI AAGLSPGPRS FHGLVVAHAL
121 NGDEQGAMHS LRKELGAGQR PLPETMIALV RLSGSKGNAT RGLEILAAME KLKYDIRQAW
181 LILVEELMRI NHLEDANKVF LKGARGGMRA TDQLYDLMIE EDCKAGDHSN ALDISYEMEA
241 AGRMATTFHF NCLLSVQATC GIPEVAYATF ENMEYGEVFM KPDTETYNWV IQAYTRAESY
301 DRVQDVAELL GMMVEDHKRV QPNVKTYALL VECFTKYCVV KEAIRHFRAL KNFEGGTVIL
361 HNAGNFEDPL SLYLRALCRE GRIVELIDAL DAMRKDNQPI PPRAMIMSRK YRTLVSSWIE
421 PLQEEAELGY EIDYLARYIE EGGLTGERKR WVPRRGKTPL DPDASGFIYS NPIETSFKQR
481 CLEDWKVHHR KLLRTLQSEG LPVLGDASES DYMRVVERLR NIIKGPALNL LKPKAASKMV
541 VSELKEELEA QGLPIDGTRN VLYQRVQKAR RINKSRGRPL WVPPIEEEEE EVDEEVDDLI
601 CRIKLHEGDT EFWKRRFLGE GLIETSVESK ETTESVVTGE SEKAIEDISK EADNEEDDDE
661 EEQEGDEDDD ENEEEEVVVP ETENRAEGED LVKNKAADAK KHLQMIGVQL LKESDEANRT
721 KKRGKRASRM TLEDDADEDW FPEEPFEAFK EMRERKVFDV ADMYTIADVW GWTWEKDFKN
781 KTPRKWSQEW EVELAIVLMT KVIELGGIPT IGDCAVILRA ALRAPMPSAF LKILQTTHSL
841 GYSFGSPLYD EIITLCLDLG ELDAAIAIVA DMETTGITVP DQTLDKVISA RQSNESPRSE
901 PEEPASTVSS
//