LOCUS AEE73980.1 465 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana BTB-POZ and MATH domain 4 protein.
ACCESSION CP002686-545
PROTEIN_ID AEE73980.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="BPM4"
/locus_tag="AT3G03740"
/gene_synonym="ATBPM4"
/gene_synonym="BTB-POZ and MATH domain 4"
/gene_synonym="BTB-POZ AND MATH DOMAIN 4"
/gene_synonym="F20H23.23"
/gene_synonym="F20H23_23"
/inference="Similar to RNA sequence,
EST:INSD:EH995030.1,INSD:BP644239.1,INSD:EL046329.1,
INSD:EL306872.1,INSD:BP648201.1,INSD:ES075018.1,
INSD:BP661191.1,INSD:DR270523.1,INSD:BP602872.1,
INSD:EL108131.1,INSD:ES029149.1,INSD:ES116404.1,
INSD:ES164219.1,INSD:DR270525.1,INSD:DR270522.1,
INSD:BP784645.1,INSD:EL050559.1,INSD:AV521226.1,
INSD:BP829972.1,INSD:BP793253.1,INSD:AA651282.1,
INSD:ES215142.1,INSD:AV441726.1,INSD:EH938342.1,
INSD:BX839402.1,INSD:ES193016.1,INSD:CB252733.1,
INSD:BP574167.1,INSD:DR270524.1,INSD:BP800495.1,
INSD:AI996467.1,INSD:EL323717.1,INSD:CB253146.1,
INSD:AV797635.1,INSD:DR378803.1,INSD:EH886897.1,
INSD:BP621389.1,INSD:BP561630.1,INSD:EL986006.1,
INSD:AV439920.1,INSD:AV827243.1,INSD:BP573939.1,
INSD:EH859142.1,INSD:AV527954.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY084246.1,INSD:AY059150.1,INSD:AF367309.1"
/note="BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro
DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH
(InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333),
BTB/POZ (InterPro:IPR013069), Kelch related
(InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210),
TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana
protein match is: BTB-POZ and MATH domain 5
(TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins
in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860;
Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes
- 277 (source: NCBI BLink)."
/db_xref="TAIR:AT3G03740"
/db_xref="Araport:AT3G03740"
intron_pos 152:2 (1/3)
intron_pos 268:0 (2/3)
intron_pos 362:1 (3/3)
BEGIN
1 MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK
61 GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV FIALASDGTD VRALFELSLL
121 DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV
181 GVVVSEIDCP RLHSIHVPAS DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV
241 FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301 AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL
361 IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK TRSVWGQFSD GGAETNGRQA
421 QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
//