LOCUS AEE73918.1 699 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homeodomain GLABROUS 8 protein.
ACCESSION CP002686-470
PROTEIN_ID AEE73918.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="HDG8"
/locus_tag="AT3G03260"
/gene_synonym="homeodomain GLABROUS 8"
/gene_synonym="T17B22.5"
/gene_synonym="T17B22_5"
/inference="Similar to RNA sequence, EST:INSD:AU229932.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK117867.1"
/note="homeodomain GLABROUS 8 (HDG8); FUNCTIONS IN: DNA
binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent, regulation of transcription; LOCATED IN:
nucleus; EXPRESSED IN: embryo, fruit, endosperm; CONTAINS
InterPro DOMAIN/s: Homeobox (InterPro:IPR001356),
Homeodomain-like (InterPro:IPR009057), Lipid-binding START
(InterPro:IPR002913), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: homeodomain GLABROUS 9 (TAIR:AT5G17320.1); Has
5172 Blast hits to 5157 proteins in 374 species: Archae -
0; Bacteria - 0; Metazoa - 3073; Fungi - 142; Plants -
1885; Viruses - 1; Other Eukaryotes - 71 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G03260"
/db_xref="Araport:AT3G03260"
intron_pos 40:2 (1/9)
intron_pos 80:0 (2/9)
intron_pos 144:0 (3/9)
intron_pos 290:0 (4/9)
intron_pos 325:0 (5/9)
intron_pos 392:0 (6/9)
intron_pos 452:1 (7/9)
intron_pos 539:0 (8/9)
intron_pos 571:0 (9/9)
BEGIN
1 MDNNGGGSSG NEQYTSGDAK QNGKRTCHRH TPQQIQRLEA YFKECPHPDE RQRNQLCREL
61 KLEPDQIKFW FQNKRTQSKT QEDRSTNVLL RGENETLQSD NEAMLDALKS VLCPACGGPP
121 FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING
181 GNMYEPSSSY GPPNFQIIQP RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE
241 TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301 NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV
361 SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV DHKLDTHKIY RDLLSGGSGY
421 GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS
481 GKIDFPQQSK NGVRVSIRMN IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD
541 ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601 LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL
661 VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
//