LOCUS AEE73914.1 266 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana expansin A13 protein.
ACCESSION CP002686-464
PROTEIN_ID AEE73914.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EXPA13"
/locus_tag="AT3G03220"
/gene_synonym="ATEXP13"
/gene_synonym="ATEXPA13"
/gene_synonym="ATHEXP ALPHA 1.22"
/gene_synonym="EXP13"
/gene_synonym="EXPANSIN 13"
/gene_synonym="expansin A13"
/gene_synonym="T17B22.9"
/gene_synonym="T17B22_9"
/inference="Similar to RNA sequence,
EST:INSD:DR218653.1,INSD:ES171532.1,INSD:BX834754.1,
INSD:AV566756.1,INSD:EL042521.1,INSD:DR218660.1,
INSD:ES053067.1,INSD:EL144783.1,INSD:ES068252.1,
INSD:DR218655.1,INSD:DR218652.1,INSD:EL079054.1,
INSD:AI995949.1,INSD:ES014454.1,INSD:CB253000.1,
INSD:EL004997.1,INSD:DR218650.1,INSD:DR218662.1,
INSD:DR218666.1,INSD:DR218647.1,INSD:DR218656.1,
INSD:EG498641.1,INSD:EL327952.1,INSD:EL998588.1,
INSD:EG498637.1,INSD:BP785744.1,INSD:DR218665.1,
INSD:DR218648.1,INSD:ES021375.1,INSD:DR218659.1,
INSD:ES089190.1,INSD:AV791297.1,INSD:AV788730.1,
INSD:ES204436.1,INSD:ES082058.1,INSD:DR218661.1,
INSD:EL184300.1,INSD:DR218654.1,INSD:ES011994.1,
INSD:DR218651.1,INSD:DR375920.1,INSD:DR218657.1,
INSD:ES102900.1,INSD:DR218649.1,INSD:DR218658.1,
INSD:DR218664.1,INSD:AV825446.1,INSD:EL014251.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY059732.1,INSD:BX822310.1,INSD:AY113990.1,
INSD:AY087629.1"
/note="expansin A13 (EXPA13); INVOLVED IN: plant-type cell
wall modification involved in multidimensional cell
growth, unidimensional cell growth, plant-type cell wall
loosening; LOCATED IN: extracellular region; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase
(InterPro:IPR009009), Pollen allergen, N-terminal
(InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare
lipoprotein A (InterPro:IPR005132), Expansin/Lol pI
(InterPro:IPR007118), Expansin 45, endoglucanase-like
(InterPro:IPR007112), Pollen allergen/expansin, C-terminal
(InterPro:IPR007117); BEST Arabidopsis thaliana protein
match is: expansin A16 (TAIR:AT3G55500.1); Has 2069 Blast
hits to 2066 proteins in 133 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 2056; Viruses - 0;
Other Eukaryotes - 13 (source: NCBI BLink)."
/db_xref="TAIR:AT3G03220"
/db_xref="Araport:AT3G03220"
intron_pos 163:2 (1/1)
BEGIN
1 MQRFLLPLLF LALSPPAICH YSSSTSSPSS SSVSSDASEW RPARATYYAA TNPRDAVGGA
61 CGYGDLVKSG YGMATVGLSE TLFERGQICG ACFELRCVDD LRWCIPGTSI ILTATNFCAP
121 NYGFDPDGGG HCNPPNKHFV LPIEAFEKIA IWKAGNMPVQ YRRINCRKEG SMRFTVDGGG
181 IFISVLITNV AGSGDIAAVK IKGSRTGWLP MGRNWGQNWH INADLRNQAL SFEVTSSDRS
241 TVTSYNVSPK NWNYGQTFEG KQFETP
//