LOCUS AEE73875.1 994 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily
protein protein.
ACCESSION CP002686-408
PROTEIN_ID AEE73875.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G02890"
/gene_synonym="F13E7.16"
/gene_synonym="F13E7_16"
/inference="Similar to RNA sequence,
EST:INSD:BE520302.1,INSD:ES006581.1,INSD:ES018476.1,
INSD:EL035802.1,INSD:ES208016.1,INSD:EL234809.1,
INSD:BE520303.1"
/note="RING/FYVE/PHD zinc finger superfamily protein;
FUNCTIONS IN: zinc ion binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, PHD-type (InterPro:IPR001965), Zinc finger,
FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis
thaliana protein match is: RING/FYVE/PHD zinc finger
superfamily protein (TAIR:AT5G16680.1); Has 3422 Blast
hits to 2706 proteins in 325 species: Archae - 2; Bacteria
- 367; Metazoa - 1746; Fungi - 295; Plants - 487; Viruses
- 5; Other Eukaryotes - 520 (source: NCBI BLink)."
/db_xref="TAIR:AT3G02890"
/db_xref="Araport:AT3G02890"
intron_pos 2:0 (1/11)
intron_pos 212:0 (2/11)
intron_pos 240:2 (3/11)
intron_pos 272:1 (4/11)
intron_pos 370:1 (5/11)
intron_pos 504:1 (6/11)
intron_pos 702:2 (7/11)
intron_pos 779:2 (8/11)
intron_pos 821:1 (9/11)
intron_pos 885:0 (10/11)
intron_pos 934:1 (11/11)
BEGIN
1 MADRRVGNRP MGRRGRLEIQ SGTCNVCSAP CSSCMHHNAE FSGSKSDESS DENSHGVLAS
61 QCSFNGDNLL RSSGVNAPGS SHNTSSEASH LVNSNHDTSS ENAESKEIIR SSDISHGPLL
121 DRPHKDQDSM KVDSCNDHQA RSTLGQGKVK EKSGAKNNEE KKNTLTGSSK HSGPRVGKSG
181 ENVLLNKADE SNTSAMSDSE SENDPEMLEL DVKVCDTCGD AGREDLLAIC SRCSDGAEHT
241 YCMRVMLKKV PKGYWLCEEC KFAEKAEKHK LETKRKRESE VNVNTQISSK RHIDKFEAVP
301 DSKRLAVGAQ IGSPKRSVLP RMSTLSRETS FKGLEKPTRK LAHYSSFNSH SSDDTESTRS
361 TDSQLQSPKG SFLKSNSFNS LSSRSKVRPV DDDMLPRQKT GNENSSLEVK EGFSKNVGKS
421 MSSRCIDVGS SNCNDSKVKG SKQLKDWSTE ANPSASISRG NSSIPYAKSP RDLKDLQSDG
481 KQGSLSKQAR HLSRNRLEDI VASVGDSSKN EKCSSSEQIS SEAKCKDELA QVDGVPRSRE
541 FREAGEKTKD AVGNHQKRNI GEDNNKGNRL RAAVDAALRK KPSFSKNRGL EQSDLPPVSN
601 VDSGCNKALK CLSSKVPVIR DWPVGFQGLP GGHPNLRTDK QTNTVNEKQF TLAGTDATTA
661 SQSVEPEVND PSVQSVMRDL PVAAPNVLST TSAIPKPEYI WQGDLEVQKS RNLSAMHSGI
721 QAYLSTLASP KVVEVVKQFP EKVTLNEVPR LSSWPAQFQD TGAKEQHVAL FFFAKDIESY
781 EKNYKPLVDN MIQKDLALKG NLEGVELLIF ASNQLPQDCQ RWNMLFFLWG VFRGKKESCS
841 NPPKNTPLPA SCVSPNRDTF RHENPSNKKS LTDRTLSRMQ SCMKEEDAKE GKACSGTEKE
901 NAFSVSYGEG EVDVETEEGE IGVSPQLKYE KTAGPGTVKS ADMNQRVNVD DLNKEGLCEG
961 PANKKLKTVT GVETGCSIVR RDTSVHKFAS RKFV
//