LOCUS AEE73864.1 397 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger protein 1 protein.
ACCESSION CP002686-391
PROTEIN_ID AEE73864.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ZFN1"
/locus_tag="AT3G02830"
/gene_synonym="F13E7.23"
/gene_synonym="F13E7_23"
/gene_synonym="PENTA 1"
/gene_synonym="PNT1"
/gene_synonym="zinc finger protein 1"
/inference="Similar to RNA sequence,
EST:INSD:BP841636.1,INSD:AV820772.1,INSD:EL149275.1,
INSD:EG511789.1,INSD:BP779562.1,INSD:DR333279.1,
INSD:AV817677.1,INSD:ES071977.1,INSD:AV819684.1,
INSD:DR333277.1,INSD:AV820874.1,INSD:BP661763.1,
INSD:EH981949.1,INSD:EG520742.1,INSD:DR354608.1,
INSD:AV796543.1,INSD:AV820648.1,INSD:EG516247.1,
INSD:EL208184.1,INSD:EL009629.1,INSD:ES023012.1,
INSD:ES213726.1,INSD:EH949972.1,INSD:AU230061.1,
INSD:EH994681.1,INSD:EG516246.1,INSD:BP656298.1,
INSD:EL000826.1,INSD:EL286829.1,INSD:BP662036.1,
INSD:ES137669.1,INSD:DR333278.1,INSD:EL168920.1,
INSD:ES183455.1,INSD:EL240287.1,INSD:EL312830.1,
INSD:BE039293.1,INSD:DR230745.1,INSD:ES089323.1,
INSD:EG516245.1,INSD:BP664950.1,INSD:EH882189.1,
INSD:EG520743.1,INSD:AV819782.1,INSD:ES161497.1,
INSD:EG516248.1,INSD:ES085938.1,INSD:BP861824.1,
INSD:BP655157.1,INSD:DR373231.1,INSD:EL041888.1,
INSD:EH804395.1,INSD:AV809115.1,INSD:EL329107.1,
INSD:BX836986.1,INSD:EL133406.1,INSD:AU238818.1,
INSD:AV441766.1,INSD:CB264825.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825278.1,INSD:AK117978.1,INSD:AF138743.1,
INSD:BX822532.1,INSD:BT025966.1"
/note="zinc finger protein 1 (ZFN1); CONTAINS InterPro
DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571);
BEST Arabidopsis thaliana protein match is: zinc finger
nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706
proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa
- 216; Fungi - 147; Plants - 868; Viruses - 0; Other
Eukaryotes - 94 (source: NCBI BLink)."
/db_xref="TAIR:AT3G02830"
/db_xref="Araport:AT3G02830"
intron_pos 19:1 (1/6)
intron_pos 72:0 (2/6)
intron_pos 93:0 (3/6)
intron_pos 133:0 (4/6)
intron_pos 213:0 (5/6)
intron_pos 322:0 (6/6)
BEGIN
1 MDFNAGVPMS SLSPLMNQDA MWQMNLSSDE TMETGSYPER PGEPDCSYYI RTGLCRFGST
61 CRFNHPRDRE LVIATARMRG EYPERIGQPE CEYYLKTGTC KFGVTCKFHH PRNKAGIAGR
121 VSLNMLGYPL RSNEVDCAYF LRTGHCKFGG TCKFNHPQPQ PTNMMVPTSG QQSYPWSRAS
181 FIASPRWQDP SSYASLIMPQ GVVPVQGWNP YSGQLGSVSP SGTGNDQNYR NLQQNETIES
241 GSQSQGSFSG YNPGSSVPLG GYYALPRENV FPERPGQPEC QFYMKTGDCK FGTVCKFHHP
301 RDRQAPPPDC LLSSIGLPLR PGEPLCVFYT RYGICKFGPS CKFDHPMRVF TYDNTASETD
361 EVVETSTGKS RRLSVSETRQ AATTSSGKDT TIDNTQQ
//