LOCUS AEE73863.1 282 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc knuckle (CCHC-type) family protein
protein.
ACCESSION CP002686-390
PROTEIN_ID AEE73863.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G02820"
/gene_synonym="F13E7.24"
/gene_synonym="F13E7_24"
/inference="Similar to RNA sequence,
EST:INSD:EL098059.1,INSD:EL984232.1,INSD:EL258490.1,
INSD:EL087934.1,INSD:ES212096.1,INSD:ES198681.1,
INSD:EL222205.1,INSD:EL967615.1,INSD:ES003493.1,
INSD:EH946729.1,INSD:EL138880.1,INSD:ES117249.1,
INSD:EL099233.1,INSD:ES174261.1,INSD:EL324549.1,
INSD:EL987084.1,INSD:DR288720.1,INSD:AU239885.1,
INSD:DR379326.1,INSD:EH813245.1,INSD:ES003514.1,
INSD:DR288721.1,INSD:ES052052.1,INSD:ES059559.1,
INSD:Z18470.1,INSD:EL213282.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK119002.1,INSD:BT025722.1"
/note="zinc knuckle (CCHC-type) family protein; FUNCTIONS
IN: zinc ion binding, nucleic acid binding; INVOLVED IN:
cell cycle, replication fork protection, response to DNA
damage stimulus; LOCATED IN: nucleus, chloroplast;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Replication
fork protection component Swi3 (InterPro:IPR012923), Zinc
finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits
to 415 proteins in 134 species: Archae - 0; Bacteria - 4;
Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28;
Other Eukaryotes - 40 (source: NCBI BLink)."
/db_xref="TAIR:AT3G02820"
/db_xref="Araport:AT3G02820"
intron_pos 105:0 (1/3)
intron_pos 146:0 (2/3)
intron_pos 179:1 (3/3)
BEGIN
1 MESAPTGCFK CGRPGHWSRD CPSSAPVAGN NSVSSSSAPS QIPNNEFQRS SSKSGTSIAP
61 APKVTKTRVQ RPKLTPELLL SEDGLGYVLR YFPKSFKYRG RGKEVSDLGN LIRLYSEWHT
121 HLLPYYSFDH FVHKVQQVAS TKRVKNCINE LRERVASGVD PNKLYEKQEE NTVPSDDQDM
181 DQPSHDEENI PSKSVDADTN ADAFEDSMLN EIFDNASKLP SDEQNMDKSS ELTEEQRARM
241 EANRLKAMEK AQNISEEQRV RMEANRLKAL ERAKARLQPN QD
//