LOCUS AEE73810.1 353 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ypt/Rab-GAP domain of gyp1p superfamily
protein protein.
ACCESSION CP002686-310
PROTEIN_ID AEE73810.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G02460"
/gene_synonym="F16B3.9"
/gene_synonym="F16B3_9"
/inference="Similar to RNA sequence,
EST:INSD:DR376333.1,INSD:DR207588.1,INSD:DR207589.1,
INSD:DR207593.1,INSD:DR207595.1,INSD:EL243975.1,
INSD:EL261588.1,INSD:ES135068.1,INSD:DR207594.1,
INSD:EL341273.1,INSD:ES167405.1,INSD:DR207591.1,
INSD:DR207596.1,INSD:EH950207.1,INSD:AU237199.1,
INSD:EL237306.1,INSD:EL010365.1,INSD:EH907283.1,
INSD:BP791487.1,INSD:BP640545.1,INSD:EL031848.1,
INSD:AU228228.1,INSD:EH843375.1,INSD:EL303717.1,
INSD:EH942018.1,INSD:EH994438.1,INSD:DR207590.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT030100.1,INSD:AK228688.1,INSD:BX822989.1,
INSD:AY087849.1"
/note="Ypt/Rab-GAP domain of gyp1p superfamily protein;
FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN:
regulation of Rab GTPase activity; LOCATED IN:
intracellular; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST
Arabidopsis thaliana protein match is: plant adhesion
molecule 1 (TAIR:AT5G15930.1); Has 5276 Blast hits to 5263
proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa
- 2708; Fungi - 1087; Plants - 526; Viruses - 0; Other
Eukaryotes - 955 (source: NCBI BLink)."
/db_xref="TAIR:AT3G02460"
/db_xref="Araport:AT3G02460"
intron_pos 51:2 (1/7)
intron_pos 117:0 (2/7)
intron_pos 174:0 (3/7)
intron_pos 213:0 (4/7)
intron_pos 279:0 (5/7)
intron_pos 299:0 (6/7)
intron_pos 332:0 (7/7)
BEGIN
1 MSRKRTENGS ESGPATSHVP VDRFGFLKQE HANSPERFSK SKTTSSTDHD REERKVRKWR
61 KMIGVGGSDW KHYVRRKPNV VRRRIRKGIP DCLRGLVWQL ISGSRDLLLM NPGVYEQLVI
121 YETSASELDI IRDISRTFPS HVFFQKRHGP GQRSLYNVLK AYSVYDRDVG YVQGMGFIAG
181 LLLLYMSEED AFWLLVALLK GAVHAPMEGL YHAGLPLVQQ YLFQLESLVK ELIPKLGEHF
241 TQEMINPSMY ASQWFITVFS YSFPFPLALR IWDVFLSEGV KIVFKVGLAL LKYCQDELVK
301 LPFEKLIHAL KTFPEDAMNP DTLLPLAYSI KVSKRLEELT LEYQKTNAKP VQP
//