LOCUS AEE73791.1 250 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana K-box region and MADS-box transcription
factor family protein protein.
ACCESSION CP002686-283
PROTEIN_ID AEE73791.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SEP2"
/locus_tag="AT3G02310"
/gene_synonym="AGAMOUS-like 4"
/gene_synonym="AGL4"
/gene_synonym="F14P3.4"
/gene_synonym="F14P3_4"
/gene_synonym="SEPALLATA 2"
/gene_synonym="TRANSCRIPTION FACTOR"
/inference="Similar to RNA sequence,
EST:INSD:ES152468.1,INSD:BP643224.1,INSD:ES015709.1,
INSD:ES071184.1,INSD:ES026937.1,INSD:ES104168.1,
INSD:ES098363.1,INSD:ES061654.1,INSD:ES193008.1,
INSD:ES010045.1,INSD:ES139017.1,INSD:ES036732.1,
INSD:ES115221.1,INSD:EL979329.1,INSD:ES023743.1,
INSD:ES029414.1,INSD:ES014511.1,INSD:EL992152.1,
INSD:ES200756.1,INSD:DR750677.1,INSD:ES006876.1,
INSD:ES067664.1,INSD:ES047811.1,INSD:ES023707.1,
INSD:ES063222.1,INSD:ES181925.1,INSD:ES067011.1,
INSD:ES160803.1,INSD:EL976464.1,INSD:ES142901.1,
INSD:ES049599.1,INSD:ES117838.1,INSD:AI995447.1,
INSD:ES055183.1,INSD:ES019934.1,INSD:ES048607.1,
INSD:ES145630.1,INSD:BP821241.1,INSD:ES109052.1,
INSD:BE521077.1,INSD:ES205471.1,INSD:EL998010.1,
INSD:BE521078.1,INSD:ES089206.1,INSD:ES045070.1,
INSD:ES146846.1,INSD:ES114316.1,INSD:ES174400.1,
INSD:EL986354.1,INSD:ES202903.1,INSD:ES186935.1,
INSD:ES052423.1,INSD:EL980197.1,INSD:AU227749.1,
INSD:ES071814.1,INSD:BE527433.1,INSD:ES181307.1,
INSD:ES166073.1,INSD:ES094793.1,INSD:ES148422.1,
INSD:ES059954.1,INSD:ES013155.1,INSD:AU236771.1,
INSD:ES178635.1,INSD:ES148107.1,INSD:ES105193.1,
INSD:ES028240.1,INSD:ES045417.1,INSD:ES121716.1,
INSD:ES152034.1,INSD:ES003683.1,INSD:ES178271.1,
INSD:EL993888.1,INSD:ES097867.1,INSD:ES040017.1,
INSD:ES043939.1,INSD:ES056772.1,INSD:ES110182.1,
INSD:ES185320.1,INSD:ES066659.1,INSD:ES012457.1,
INSD:ES207933.1,INSD:BP827649.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT020478.1,INSD:BX823794.1,INSD:M55552.1,
INSD:BT004054.1"
/note="SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding,
DNA binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: flower development, ovule
development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant
structures; EXPRESSED DURING: 7 growth stages; CONTAINS
InterPro DOMAIN/s: Transcription factor, MADS-box
(InterPro:IPR002100), Transcription factor, K-box
(InterPro:IPR002487); BEST Arabidopsis thaliana protein
match is: K-box region and MADS-box transcription factor
family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to
7362 proteins in 916 species: Archae - 3; Bacteria - 0;
Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0;
Other Eukaryotes - 75 (source: NCBI BLink)."
/db_xref="TAIR:AT3G02310"
/db_xref="Araport:AT3G02310"
intron_pos 62:2 (1/6)
intron_pos 90:0 (2/6)
intron_pos 110:2 (3/6)
intron_pos 144:0 (4/6)
intron_pos 172:0 (5/6)
intron_pos 220:2 (6/6)
BEGIN
1 MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVSLIVFSN RGKLYEFCST
61 SNMLKTLERY QKCSYGSIEV NNKPAKELEN SYREYLKLKG RYENLQRQQR NLLGEDLGPL
121 NSKELEQLER QLDGSLKQVR CIKTQYMLDQ LSDLQGKEHI LLDANRALSM KLEDMIGVRH
181 HHIGGGWEGG DQQNIAYGHP QAHSQGLYQS LECDPTLQIG YSHPVCSEQM AVTVQGQSQQ
241 GNGYIPGWML
//