LOCUS AEE73779.1 452 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana COBRA-like protein 1 precursor protein.
ACCESSION CP002686-259
PROTEIN_ID AEE73779.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="COBL1"
/locus_tag="AT3G02210"
/gene_synonym="COBRA-like protein 1 precursor"
/gene_synonym="F14P3.14"
/gene_synonym="F14P3_14"
/inference="Similar to RNA sequence,
EST:INSD:EL019551.1,INSD:EL979742.1,INSD:BP649075.1,
INSD:BP659039.1,INSD:EL158148.1,INSD:ES011212.1,
INSD:BP648273.1,INSD:ES148899.1,INSD:EL078723.1,
INSD:EH826169.1,INSD:EL004819.1,INSD:CF773690.1,
INSD:AU239422.1,INSD:ES020189.1,INSD:EL314697.1,
INSD:BP663141.1,INSD:BP826020.1,INSD:BE529011.1,
INSD:ES018865.1,INSD:AU230727.1,INSD:ES103796.1,
INSD:EL181611.1,INSD:ES153704.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT005373.1,INSD:BX824795.1,INSD:AK118555.1"
/note="COBRA-like protein 1 precursor (COBL1); CONTAINS
InterPro DOMAIN/s: Glycosyl-phosphatidyl
inositol-anchored, plant (InterPro:IPR006918), COBRA-like
(InterPro:IPR017391); BEST Arabidopsis thaliana protein
match is: COBRA-like protein 2 precursor
(TAIR:AT3G29810.1); Has 380 Blast hits to 369 proteins in
30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 380; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT3G02210"
/db_xref="Araport:AT3G02210"
intron_pos 32:1 (1/5)
intron_pos 59:0 (2/5)
intron_pos 211:1 (3/5)
intron_pos 263:2 (4/5)
intron_pos 357:1 (5/5)
BEGIN
1 MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT
61 VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ GDCSKFKGTI PHCCKKTPSV
121 VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA
181 PGPGYTCSPA KIVKPTRFIG TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK
241 TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301 VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG
361 ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW AFPRRIYFNG DNCVMPPPDS
421 YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
//