LOCUS AEE73769.1 278 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana plastid transcription factor 1 protein.
ACCESSION CP002686-247
PROTEIN_ID AEE73769.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PTF1"
/locus_tag="AT3G02150"
/gene_synonym="CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 13"
/gene_synonym="F1C9.6"
/gene_synonym="plastid transcription factor 1"
/gene_synonym="TCP13"
/gene_synonym="TEOSINTE BRANCHED1"
/gene_synonym="TFPD"
/inference="Similar to RNA sequence,
EST:INSD:DR218131.1,INSD:DR372431.1,INSD:EG504919.1,
INSD:EG504918.1,INSD:DR218129.1,INSD:DR218134.1,
INSD:BG459610.1,INSD:DR751080.1,INSD:DR218128.1,
INSD:DR218133.1,INSD:DR218135.1,INSD:DR218132.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY085519.1"
/note="plastid transcription factor 1 (PTF1); FUNCTIONS
IN: sequence-specific DNA binding transcription factor
activity; INVOLVED IN: cell differentiation, positive
regulation of development, heterochronic, regulation of
transcription, leaf morphogenesis; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Transcription factor, TCP (InterPro:IPR005333),
Transcription factor TCP subgroup (InterPro:IPR017887);
BEST Arabidopsis thaliana protein match is: TEOSINTE
BRANCHED 1, cycloidea and PCF transcription factor 5
(TAIR:AT5G60970.1); Has 1398 Blast hits to 1398 proteins
in 300 species: Archae - 0; Bacteria - 0; Metazoa - 18;
Fungi - 2; Plants - 1368; Viruses - 0; Other Eukaryotes -
10 (source: NCBI BLink)."
/db_xref="TAIR:AT3G02150"
/db_xref="Araport:AT3G02150"
intron_pos 279:0 (1/1)
BEGIN
1 MNIVSWKDAN DEVAGGATTR REREVKEDQE ETEVRATSGK TVIKKQPTSI SSSSSSWMKS
61 KDPRIVRVSR AFGGKDRHSK VCTLRGLRDR RVRLSVPTAI QLYDLQERLG VDQPSKAVDW
121 LLDAAKEEID ELPPLPISPE NFSIFNHHQS FLNLGQRPGQ DPTQLGFKIN GCVQKSTTTS
181 REENDREKGE NDVVYTNNHH VGSYGTYHNL EHHHHHHQHL SLQADYHSHQ LHSLVPFPSQ
241 ILVCPMTTSP TTTTIQSLFP SSSSAGSGTM ETLDPRQM
//