LOCUS AEE73735.1 307 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DHBP synthase RibB-like alpha/beta
domain-containing protein protein.
ACCESSION CP002686-195
PROTEIN_ID AEE73735.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G01920"
/gene_synonym="F28J7.25"
/inference="Similar to RNA sequence,
EST:INSD:BP560691.1,INSD:AV785125.1,INSD:EH856482.1,
INSD:EL210394.1,INSD:EL306242.1,INSD:EL259927.1,
INSD:CA781534.1,INSD:ES075290.1,INSD:AV540180.1,
INSD:AV819348.1,INSD:EL246410.1,INSD:EH800257.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY079025.1,INSD:AY143853.1"
/note="DHBP synthase RibB-like alpha/beta domain; CONTAINS
InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC
(InterPro:IPR004388), DHBP synthase RibB-like alpha/beta
domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal
(InterPro:IPR006070); Has 7227 Blast hits to 7227 proteins
in 2277 species: Archae - 193; Bacteria - 5396; Metazoa -
127; Fungi - 76; Plants - 77; Viruses - 0; Other
Eukaryotes - 1358 (source: NCBI BLink)."
/db_xref="TAIR:AT3G01920"
/db_xref="Araport:AT3G01920"
intron_pos 103:2 (1/7)
intron_pos 121:2 (2/7)
intron_pos 130:0 (3/7)
intron_pos 171:0 (4/7)
intron_pos 226:2 (5/7)
intron_pos 250:0 (6/7)
intron_pos 283:0 (7/7)
BEGIN
1 MAVAKLHGGG MAAMRLLLLP SPMTHRRPST LPSTASLSPR RYIVALAAKR SPKRLKYSTP
61 RFTKEGELVY IEVDPCGVDS WKLQPVIDLL KQGAVGVIPT DTVYAIACDC KNHSAVERLR
121 RIKKIESSKP LSILCRSLRD IDTFTMGFPR GDGHGHANVF RAVKQCLPGP YTFILTASKE
181 LPKQCVGYGT TSVKYASRKN VGVRISDDAL CQAILQQMDA PLICTSVKGP KENEWMIDPT
241 AIGDIYGPEG LDFVVDGGIR VAEPSTIVDM TGPYPKVIRE GKGPILPWMV VEDDESSLRQ
301 DLMASGT
//