LOCUS AEE73715.1 205 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L13 family protein protein.
ACCESSION CP002686-171
PROTEIN_ID AEE73715.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G01790"
/gene_synonym="F28J7.12"
/gene_synonym="F28J7_12"
/inference="Similar to RNA sequence,
EST:INSD:DR228368.1,INSD:DR228369.1,INSD:DR208218.1,
INSD:ES191962.1,INSD:ES041150.1,INSD:BP640296.1,
INSD:AV819591.1,INSD:DR361135.1,INSD:ES185492.1,
INSD:ES126833.1,INSD:EL296327.1,INSD:BP668949.1,
INSD:DR208219.1,INSD:ES013130.1,INSD:BP779353.1,
INSD:BP618166.1,INSD:AI995201.1,INSD:ES166913.1,
INSD:ES107051.1,INSD:CK117629.1,INSD:DR208220.1,
INSD:ES212790.1,INSD:ES199428.1,INSD:DR208217.1,
INSD:EG510107.1,INSD:ES118693.1,INSD:EH901199.1,
INSD:ES164053.1,INSD:ES060490.1,INSD:DR228372.1,
INSD:DR228371.1,INSD:DR228370.1,INSD:EG507248.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822472.1,INSD:BT010192.1,INSD:BX822466.1"
/note="Ribosomal protein L13 family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: ribosome, intracellular, large
ribosomal subunit; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Ribosomal protein L13, bacterial-type
(InterPro:IPR005823), Ribosomal protein L13
(InterPro:IPR005822); BEST Arabidopsis thaliana protein
match is: Ribosomal protein L13 family protein
(TAIR:AT1G78630.1); Has 7701 Blast hits to 7701 proteins
in 2675 species: Archae - 7; Bacteria - 5222; Metazoa -
123; Fungi - 136; Plants - 125; Viruses - 0; Other
Eukaryotes - 2088 (source: NCBI BLink)."
/db_xref="TAIR:AT3G01790"
/db_xref="Araport:AT3G01790"
intron_pos 17:0 (1/4)
intron_pos 41:0 (2/4)
intron_pos 96:2 (3/4)
intron_pos 134:0 (4/4)
BEGIN
1 MATQAAAAAS FKGNLKKAVA GIKRINLDGL RWRVFDARGQ VLGRLASQIS TVLQAKDKPT
61 YCPNRDDGDI CIVLNAKEIG FTGRKLTDKF YRWHTGYIGH LKERSLKDQM AKDPTEVIRK
121 AVWRMLPSNN LRDDRDRKLR IFEGGEHPFG DKPLEPFVMP PRRVREMRPR ARRAMIRAQK
181 KAEQAENEGT EVKKGKKRTL SEVPA
//