LOCUS AEE73699.1 489 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING domain ligase1 protein.
ACCESSION CP002686-149
PROTEIN_ID AEE73699.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RGLG1"
/locus_tag="AT3G01650"
/gene_synonym="F4P13.19"
/gene_synonym="F4P13_19"
/gene_synonym="RING domain ligase1"
/inference="Similar to RNA sequence,
EST:INSD:EL067764.1,INSD:BE520525.1,INSD:AV551002.1,
INSD:EH982347.1,INSD:EH855325.1,INSD:AV558892.1,
INSD:AV559513.1,INSD:AV538696.1,INSD:CD533691.1,
INSD:EL024317.1,INSD:EL233375.1,INSD:CD534794.1,
INSD:EL226608.1,INSD:EH910080.1,INSD:AV566425.1,
INSD:ES202053.1,INSD:EL225812.1,INSD:BE527562.1,
INSD:EH805660.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX824117.1"
/note="RING domain ligase1 (RGLG1); FUNCTIONS IN: zinc ion
binding; INVOLVED IN: N-terminal protein myristoylation,
cytokinin metabolic process, auxin metabolic process;
LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Zinc finger, RING-type
(InterPro:IPR001841), Copine (InterPro:IPR010734), von
Willebrand factor, type A (InterPro:IPR002035); BEST
Arabidopsis thaliana protein match is: RING domain ligase2
(TAIR:AT5G14420.2); Has 24426 Blast hits to 13505 proteins
in 916 species: Archae - 24; Bacteria - 3147; Metazoa -
7235; Fungi - 3380; Plants - 4548; Viruses - 743; Other
Eukaryotes - 5349 (source: NCBI BLink)."
/db_xref="TAIR:AT3G01650"
/db_xref="Araport:AT3G01650"
intron_pos 143:0 (1/9)
intron_pos 171:1 (2/9)
intron_pos 218:1 (3/9)
intron_pos 256:1 (4/9)
intron_pos 289:0 (5/9)
intron_pos 315:2 (6/9)
intron_pos 351:0 (7/9)
intron_pos 393:2 (8/9)
intron_pos 445:0 (9/9)
BEGIN
1 MGGGNSKEES SSPSSSSWAS HQSYPQYGPD SYNYPPPPTY APAPSPAPAP APVPAPSPAS
61 SYGPQYSQEG YASQPNNPPP PTYAPAPSPA SSYGHQYSQE GYASAASQPN YPPPPSQSQV
121 ADRKKFDRRY SKISDNYSSL LQVSEALGRA GLESSNLIVG IDFTKSNEWT GAKSFNRKSL
181 HHLSNTPNPY EQAITIIGRT LAAFDEDNLI PCYGFGDAST HDQDVFSFYP EGRFCNGFEE
241 VLARYREIVP QLKLAGPTSF APIIEMAMTV VEQSSGQYHV LVIIADGQVT RSVDTEHGRL
301 SPQEQKTVDA IVKASTLPLS IVLVGVGDGP WDMMQEFDDN IPARAFDNFQ FVNFTEIMSK
361 NKDQSRKETE FALSALMEIP PQYKATIELN LLGVRNGNIP QRIPLPPPVQ SGSSFSSSRI
421 PNFEPSVPPY PFESKQMSSA DDIQLCPICL SNPKNMAFGC GHQTCCECGP DLKVCPICRA
481 PIQTRIKLY
//