LOCUS AEE73695.1 820 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cell division cycle 48C protein.
ACCESSION CP002686-142
PROTEIN_ID AEE73695.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CDC48C"
/locus_tag="AT3G01610"
/gene_synonym="cell division cycle 48C"
/gene_synonym="emb1354"
/gene_synonym="embryo defective 1354"
/gene_synonym="F4P13.15"
/gene_synonym="F4P13_15"
/inference="Similar to RNA sequence,
EST:INSD:ES188606.1,INSD:AV551586.1,INSD:EG527456.1,
INSD:AU227366.1,INSD:AV829462.1,INSD:AV523483.1,
INSD:BP634342.1,INSD:ES082607.1,INSD:EG527467.1,
INSD:AV541162.1,INSD:AV529174.1,INSD:EH935114.1,
INSD:ES190960.1,INSD:AV806328.1,INSD:BP631842.1,
INSD:AV539184.1,INSD:ES160832.1,INSD:BP852347.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY136443.1,INSD:BT002135.1"
/note="cell division cycle 48C (CDC48C); FUNCTIONS IN:
nucleoside-triphosphatase activity, ATPase activity,
nucleotide binding, ATP binding; INVOLVED IN: embryo
development ending in seed dormancy; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 11 growth stages;
CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core
(InterPro:IPR003959), ATPase, AAA+ type, core
(InterPro:IPR003593), ATPase, AAA-type, conserved site
(InterPro:IPR003960); BEST Arabidopsis thaliana protein
match is: ATPase, AAA-type, CDC48 protein
(TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins
in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa
- 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other
Eukaryotes - 15170 (source: NCBI BLink)."
/db_xref="TAIR:AT3G01610"
/db_xref="Araport:AT3G01610"
intron_pos 309:1 (1/8)
intron_pos 505:0 (2/8)
intron_pos 556:0 (3/8)
intron_pos 595:0 (4/8)
intron_pos 630:0 (5/8)
intron_pos 652:0 (6/8)
intron_pos 739:0 (7/8)
intron_pos 789:0 (8/8)
BEGIN
1 MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN
61 VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE KEEKLQRAEQ SHLRKRNMER
121 SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP
181 AEKNVEVETV SNKGRSKLAT MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK
241 ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301 TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC
361 MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG RFETEIALTA PDEDARAEIL
421 SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD
481 KSWLRMPWPE EELEKLFVKM SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF
541 NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601 KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE
661 RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER ASILKAIARK KPIDPSVDLD
721 GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL
781 VSPSVNKQQR RHYDALSTKL QESVGRNTEQ VTIGPSFTLE
//