LOCUS AEC10937.1 242 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Exonuclease family protein protein.
ACCESSION CP002685-7582
PROTEIN_ID AEC10937.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G48100"
/inference="Similar to RNA sequence,
EST:INSD:AV786718.1,INSD:CD529749.1,INSD:BP670281.1,
INSD:ES027264.1,INSD:DR351217.1,INSD:DR351220.1,
INSD:DR351210.1,INSD:BP647217.1,INSD:BP652463.1,
INSD:BP563516.1,INSD:BP655363.1,INSD:BP623544.1,
INSD:BP842255.1,INSD:DR351211.1,INSD:ES079139.1,
INSD:DR351215.1,INSD:DR351213.1,INSD:ES185106.1,
INSD:EL242158.1,INSD:AV551998.1,INSD:BP640517.1,
INSD:ES076524.1,INSD:BP645161.1,INSD:BP851963.1,
INSD:BP580822.1,INSD:AV542166.1,INSD:BE529856.1,
INSD:DR351212.1,INSD:BP560669.3,INSD:CF773457.1,
INSD:BP667794.1,INSD:BP856133.1,INSD:ES101186.1,
INSD:ES192053.1,INSD:DR351221.1,INSD:Z35034.1,
INSD:BP861787.1,INSD:ES109996.1,INSD:DR351218.1,
INSD:DR351219.1,INSD:DR351216.1,INSD:ES151684.1,
INSD:BP790154.1,INSD:DR351214.1,INSD:BP801726.1,
INSD:AV794842.1,INSD:BP594387.1,INSD:BP644206.1"
/note="Exonuclease family protein; FUNCTIONS IN:
exonuclease activity, zinc ion binding, nucleic acid
binding; INVOLVED IN: biological_process unknown; LOCATED
IN: intracellular; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880),
Polynucleotidyl transferase, ribonuclease H fold
(InterPro:IPR012337), Zinc finger, C2H2-type
(InterPro:IPR007087), Exonuclease, RNase T/DNA polymerase
III (InterPro:IPR013520); BEST Arabidopsis thaliana
protein match is: Exonuclease family protein
(TAIR:AT3G27970.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G48100"
/db_xref="TAIR:AT2G48100"
intron_pos 14:2 (1/4)
intron_pos 67:1 (2/4)
intron_pos 114:0 (3/4)
intron_pos 179:2 (4/4)
BEGIN
1 MDSQLNPSKR RKISVRHRCV ACYKMFNRRE HLVEHMKISY HSLHQPRCGV CLKHCKSFES
61 VREHLNVPDH LSKGNCKAIF TKRGCTLCLQ IFEEAFALAE HKNKCHLSPP RPLGTSTQRN
121 PSSSLAGSRL KAMALDCEMV GGGADGTIDQ CASVCLVDDD ENVIFSTHVQ PLLPVTDYRH
181 EITGLTKEDL KDGMPLEHVR ERVFSFLCGG QNDGAGRLLL VGHDLRHDMS CLKLEYPSHL
241 LR
//